Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3378 ATGGAGGGCTTTAATGGGCCCAAAAGAAAAGATGAGGATCCACGTTATACGAGATCTTCAACGCGATTTGGAGAACAAAGCCAACGATCTCAGCAAGCTTCAGAAGGGCAAGAAACCCTAACCCTTTCTTCTTATTCTTCTTCATGTTCCTATTTTCGTATTCCATTCCATGTTTTGTTTGCTTGGTTTTTGTGGGATGACATTTTTGGTGCTTGCTTACTTCAATTAGACATCGCAAAGAATCACCAAGTGAGAAAGAAGTACACGGTGCAGCTTGGAGAGAACGAGCTTGTGCTCAAGGAGTTGGATTTATTGAACGATGACGCAAATGTTTACAAGATGATTGGTCCTGTACTCGTCAAGCAAGATTTGGCTGAGGCCAATGCCAATGTCCGCAAGAGAATCGAATACATCTCTGCCGAATTGAAGCGTCTTGATGCCACTGTTCAAGATTTGGAAGAGAAGCAGAATAGCAAGAAAGATGCGGACTATATTGATGAGGTCTTTGACGGGATTGATGTGTCTAGCACTATTTTCTTCTTTGCTGGATTTGTCACTATTCTTAAGGAAAAACTGTTCTGGCAGGAATTAATTGACGAATTAAAAACTAATGGGGTAAAATTTCGCACAACTAGATTGGATCAAATGAATGAGAATAGAAAAGATTTGCTCTCTCAAGCTGTGAATTCCTTCAACCATGACCTATTCCCTGTTGGTCTCAGGGTTCTTCTTGTTGACGATGATCCCTCTGTTCTCAAAATCTTTGATCAAGTGTCTGCTCAATGCCACTATCATGTGACCACATGCGACGATGCCTATGTTGCTCTGAATTTTTTGAGGGAGAAAAGGGACTCTTTTGATGTTGTCATCATAAGTGATGTTCACATGCCAAACTTGGAGTTCCTTCACCATCTTGACCAAGAATTCAACGTTCCGCTTGTTTTGATGTGTGTGGATGGTTCAAGTAGTAGTGTGATGGAGGGTTATAGGCACAGAGCTTGTCACTATCTGACCAAACCCATTCATGAAGATGACATAAGGATCATATGGCAGCACGCTGTTAGGAACAAGACACACAATAAAGAGTACAGCACTTGTTCTGTTATTGATGCAACCCAAGGAAGAAAGAGGAGGCTATCGAGAGGAGAAGGAGATCATCATCCAATGCCGGCGGCAAAGAAGCCCCGTTTTAAGTGGACTAAAGAGTGCCATCAACAATTTTTAGATGCTGTGGGACAACTCGGCAATGATAAGGTTGTACCGAAGAAAATTCTGCAATTGATGAACATACCTGGATTGACGAGAGCGAATGTTGCTAGTCATTTGCAGAAGTACAGACTTCAGACGAAGAAAAAGAGCAAGGCCAGCAAGGCTCATCAGGAACAGAATGGAATACTAAATGGGACTCTACAACCTAATAACGGATTGGGCATGCAAGCTCTGGCTAATGCTGATGCTATCAGACATTATGTCTCACCTCAAGCACAATCGGAGAACCACTACTGCCATTCCAGTAATGAATCATCACAGCAAGCAGCATATGGTGATACTTATACTACAGCACCACTAACCTACGATCCCAACAACAACTACATTCCTTATCTTTATAATCATAATGGTGAGCAACACCACCAACAGCAAATGATGATGATGCAGCAGTATCATCCTATTCATCAAATCCTACCTTATAATGAGGAGCATGATTTTATCTCAGATTCATTCATTTATGACAATGTTCAACCAATTTCTTACATTATGGCTCCTCCTTCTCATCAATCCCAACCTTATGCTGGAATCAATCCTGCTTCTGATGTCAGCTACAACAACAACAACACTTACAGCTTTGTTGGTGGGACCTGCTCTGTTCTTGACCAGAATACATTTTCACCTCAAATACTCAACAACAACAACTATTCTTCATCATCATCATTGGGTAATATTGCTGAATTACATGGCTAG 1959 0.4135 MEGFNGPKRKDEDPRYTRSSTRFGEQSQRSQQASEGQETLTLSSYSSSCSYFRIPFHVLFAWFLWDDIFGACLLQLDIAKNHQVRKKYTVQLGENELVLKELDLLNDDANVYKMIGPVLVKQDLAEANANVRKRIEYISAELKRLDATVQDLEEKQNSKKDADYIDEVFDGIDVSSTIFFFAGFVTILKEKLFWQELIDELKTNGVKFRTTRLDQMNENRKDLLSQAVNSFNHDLFPVGLRVLLVDDDPSVLKIFDQVSAQCHYHVTTCDDAYVALNFLREKRDSFDVVIISDVHMPNLEFLHHLDQEFNVPLVLMCVDGSSSSVMEGYRHRACHYLTKPIHEDDIRIIWQHAVRNKTHNKEYSTCSVIDATQGRKRRLSRGEGDHHPMPAAKKPRFKWTKECHQQFLDAVGQLGNDKVVPKKILQLMNIPGLTRANVASHLQKYRLQTKKKSKASKAHQEQNGILNGTLQPNNGLGMQALANADAIRHYVSPQAQSENHYCHSSNESSQQAAYGDTYTTAPLTYDPNNNYIPYLYNHNGEQHHQQQMMMMQQYHPIHQILPYNEEHDFISDSFIYDNVQPISYIMAPPSHQSQPYAGINPASDVSYNNNNTYSFVGGTCSVLDQNTFSPQILNNNNYSSSSSLGNIAELHG* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3378 652 ProSiteProfiles Response regulatory domain profile. 241 354 IPR001789 GO:0000160
Aev03g3378 652 SUPERFAMILY Homeodomain-like 392 451 IPR009057 -
Aev03g3378 652 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 391 450 IPR017930 -
Aev03g3378 652 MobiDBLite consensus disorder prediction 1 37 - -
Aev03g3378 652 CDD REC_typeB_ARR-like 242 354 - -
Aev03g3378 652 PANTHER TWO-COMPONENT RESPONSE REGULATOR 236 556 IPR045279 GO:0009736
Aev03g3378 652 SMART REC_2 240 350 IPR001789 GO:0000160
Aev03g3378 652 Gene3D - 391 452 - -
Aev03g3378 652 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 236 556 - -
Aev03g3378 652 MobiDBLite consensus disorder prediction 1 19 - -
Aev03g3378 652 Pfam Prefoldin subunit 75 161 IPR002777 GO:0006457|GO:0016272|GO:0051082
Aev03g3378 652 Coils Coil 135 162 - -
Aev03g3378 652 MobiDBLite consensus disorder prediction 374 396 - -
Aev03g3378 652 SUPERFAMILY Prefoldin 74 161 - -
Aev03g3378 652 Pfam Response regulator receiver domain 242 347 IPR001789 GO:0000160
Aev03g3378 652 MobiDBLite consensus disorder prediction 20 37 - -
Aev03g3378 652 Gene3D - 73 164 IPR009053 -
Aev03g3378 652 CDD Prefoldin_beta 74 155 - -
Aev03g3378 652 SUPERFAMILY CheY-like 239 364 IPR011006 -
Aev03g3378 652 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 394 448 IPR006447 GO:0003677
Aev03g3378 652 Pfam Myb-like DNA-binding domain 398 446 IPR001005 -
Aev03g3378 652 Gene3D - 240 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3378 Aev-Chr3 31438517 31445007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3378 234 477 Response Regulator Gene Family AT4G31920 41.538 1.98e-50 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Aev03g3378 Response_reg 3.5e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3378 - K14491 vvi:100250832 232.261