Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3364 ATGGCAGATGTGGAAGCTGATGTTGCGACAGGGCAGCCAAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGGGGCGTCGATCTTGACGCACTTCTTGACATGTCCACCGATGAGTTGGTCAAGCTCTTCAGTGCCCGTGCACGCAGAAGGTTCCAGAGGGGTCTCACCAGAAAGCCCATGGCCTTGATCAAGAAGCTCCGCAAGGCGAAAAGGGAAGCACCAGCAGGTGAGAAGCCAGAACCAGTGCGCACCCACCTGCGAAACATGATCATTGTGCCGGAGATGATTGGTAGCATCATCGGAGTGTACAATGGCAAGACATTCAACCAGGTTGAGATCAAGCCTGAGATGATTGGCCATTACCTTGCCGAGTTCTCTATCTCATACAAGCCCGTCAAGCACGGTAGACCTGGTGCCAAGCTTGACATTGGTGACAATGTCTTAGATGCTAAAGTTTGTTGGTTTCTCATTTCACACATTGCAGCTCTTCCTCCCATGGCTGAGCTCTCTTCCGTCACGCTCGGAGGCAAGGGCTCCTCCCTCTCCTCCACCTCCGTCTCCGCCGTCGCCTCCGCCCGCGCTACTGTCCGGATCGACTCATCCGCCTTCGACAGGCTCTCATCCTCCTCCGCAACGGCGTCGTTCAAGCACACCATCACCCTCCCTGACTTCCTCACCATCTCCGAATCCAGAGCCTCCCTTATCGTGCTCCTCAACAAGCTCGTCCTCTCTTCCTCCCCTTCCATTCGCCCTCTCCTCCCTCAACTCATCTCCGAATCCCTCAGTACCAATCCCAATGCCTTCCGATTCGATGAACTCGAGCTCACCGAGCACGAGTTGCTTATCCTCAACAACGGTTCTTCTGCACTGCTCGGTGTTTCCGCCGTTTTGGACCACCAATCCGCCGCATTGTCCGCGTTTTCTGACGTGGCCGCCGCGTTATCCTGCGAAGCATCAAAAGCCGACGTAACTGCCTTCAATCTGATGGATTCCGGTGATGGCCACACCTCGAAGGAGGAAGTTGGAGTCGCCAGCGATATGAGGGTTTTGCTTAACGGATCCAAGTTGGTTGGGAAGCAGAAGATTGGATCAGTTTCCATGGTTCCAAAGGTTCATGGCTCTTTGCGTGAGCAAGTGAAATCGGTGCATTCGAAGATGCGAGTGGAATTGAATTCGGGGCTTAAATTGGCTGAAATTCAGGCTGGGAGTGACGGCACTGAGCAAGCTGTATGCACTGTGTTGTTGTCATTGGCAGCGTCATTGAGGGAACTAGGCGAGTGTAGCTTTTTGCGTGCTAAGAGTAATCTGGAGTCCATTGGCAGTGATGATTTGAAATCGAGTCTGGGTGTGATATTTGGGAAGGAATGCCCCACTGATGCTAGTTTAGGGAGTGGTTTTAATGAGGCTTTGAAGTTTGTTTTCGGAAAGGACTATGATAAGTTTGCACATGAGGTCAATGTGCTGTTGGGGCTTGTGTGGAAGATTGTGGCATGGGAAGCTGTGACTGCTTTTGCGGTGCTTGAGGGTGTTGTGCTGGATGATAAGATCCAAGGTGCTCAGGGTAATGTAGAGGATTCGAAAGCAGAGAAGAAGAAGAAGAAGGTTGTTTTGGGGAAAGGAACTAGCTCAATTTTGCCATTGATTAAGGATGGGTTGCAGAGTAAAAGAGGGAGTTCTGCTGAGAATTCAGGGTTGCTAGAGAAATGGGTGGAGGATTTTCTATCGTTTTTCGATTCGACTGATCCTGAGTTCAATGGGTTTTTATTGAAGGTAAAGGATATTGTAGAAAGCAATGAAAGCAGAAGATTGCCCAAGATTCCTAAGGGTACTCGTGATTTTGCCAAAGAACAAATGACAATCAGAAAGAAAGCTTTTTCAATAATAGAAGAAGTTTTTGAGAGGCATGGTGCCACTGCCCTGGATACACCTGTCTTCGAATTGCGAGAAACACTCATGGGAAAGTATGGAGAAGATTCAAAGTTAATTTATGATCTTGCTGATCAGGGTGGGGAGCTTTGTTCGTTGAGGTATGACTTGACAGTTCCATTTGCCAGGTTCGTAGCAATGAATGGTCTGACATCTATGAAAAGGTACCAAATAGCTAAGGTCTACAGAAGAGACAACCCATCAAAGGGAAGATACCGTGAATTTTATCAATGCGACTTTGATATTGCTGGTCCATCTGAAAAAATGGCTGCAGACTTTGAGGTTGTTAGAATTTTGACTGAACTGCTGGATGAGCTAGACATTGGGGATTTTGAGATAAAGTTGAACCATAGAAAGTTACTGGATGGCATGATGCAAATATGTGGAGTACCTCCTGAAAAGTTTAGGACAATATGCTCAAGCATTGACAAGTTAGACAAACAGTCTTTTGAACAGATAAGAAAAGAAATGGTAGAAGAGAAAGGATTATCAGCTGAGACTGCAGACAGAATTGGAACATATGTTAAAGAAAAAGGATCTCCTTTACCATTATTATCTAAATTTAAGCAAGAGGGCAGTGCTTTCCTAGAAAATGCGGGATCTGTTGAAGCCTTGAATGACCTGGAAATTTTATTCAAGGCACTGGAAAAATCAAAACGTATTGATAAAGTGGTTTTTGACTTGAGTCTTGCCAGGGGTCTCGATTATTACACTGGAGTTATATATGAAGCTGTTTTCAAAGGGGGCACTCAGGTTGGTTCAATTGCTGCTGGTGGCCGATATGATAACTTGATTGGGATGTTTGGTTCAAAGCAAGTTCCAGCAGTTGGTGTTAGTCTTGGAATTGAAAGAGTATTTGCCATAATGGAACAGCAGCAGAAGGATCAGAAGCAGATGGTGCGACCAACCAAGACTGAAGTCCTAGTGAGCATATTAGGGAATGACCTAACCCTAGCTGCAGAGCTGGCGGGTGAGTTGTGGGATGGTGGGGTGAAAGCAGAATTCTTGGTGAATAAAAGAAGACAGAAGCACTTTGACTATGCAAGAGAATCAAGGATACCATGGATGGTGCTTGTTGGTGAGCAGGAAATAAAGGAAGGCGTTGTGCAGTTGAAAGATTTGGAGGCTAACAATGATGTAAACATTCCGAGAGATAGATTTGTGGAGGAAATTCGGACAAGGTTAAGTTAA 3117 0.4649 MADVEADVATGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGAKLDIGDNVLDAKVCWFLISHIAALPPMAELSSVTLGGKGSSLSSTSVSAVASARATVRIDSSAFDRLSSSSATASFKHTITLPDFLTISESRASLIVLLNKLVLSSSPSIRPLLPQLISESLSTNPNAFRFDELELTEHELLILNNGSSALLGVSAVLDHQSAALSAFSDVAAALSCEASKADVTAFNLMDSGDGHTSKEEVGVASDMRVLLNGSKLVGKQKIGSVSMVPKVHGSLREQVKSVHSKMRVELNSGLKLAEIQAGSDGTEQAVCTVLLSLAASLRELGECSFLRAKSNLESIGSDDLKSSLGVIFGKECPTDASLGSGFNEALKFVFGKDYDKFAHEVNVLLGLVWKIVAWEAVTAFAVLEGVVLDDKIQGAQGNVEDSKAEKKKKKVVLGKGTSSILPLIKDGLQSKRGSSAENSGLLEKWVEDFLSFFDSTDPEFNGFLLKVKDIVESNESRRLPKIPKGTRDFAKEQMTIRKKAFSIIEEVFERHGATALDTPVFELRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARFVAMNGLTSMKRYQIAKVYRRDNPSKGRYREFYQCDFDIAGPSEKMAADFEVVRILTELLDELDIGDFEIKLNHRKLLDGMMQICGVPPEKFRTICSSIDKLDKQSFEQIRKEMVEEKGLSAETADRIGTYVKEKGSPLPLLSKFKQEGSAFLENAGSVEALNDLEILFKALEKSKRIDKVVFDLSLARGLDYYTGVIYEAVFKGGTQVGSIAAGGRYDNLIGMFGSKQVPAVGVSLGIERVFAIMEQQQKDQKQMVRPTKTEVLVSILGNDLTLAAELAGELWDGGVKAEFLVNKRRQKHFDYARESRIPWMVLVGEQEIKEGVVQLKDLEANNDVNIPRDRFVEEIRTRLS* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3364 1038 CDD HisRS-like_core 617 932 IPR041715 -
Aev03g3364 1038 Hamap 30S ribosomal protein S19 [rpsS]. 47 140 IPR002222 GO:0003735|GO:0005840|GO:0006412
Aev03g3364 1038 Gene3D 30s Ribosomal Protein S19; Chain A 8 143 IPR023575 GO:0003735|GO:0005840|GO:0006412
Aev03g3364 1038 SUPERFAMILY Class II aaRS and biotin synthetases 605 934 IPR045864 -
Aev03g3364 1038 SUPERFAMILY L-aspartase-like 177 392 IPR008948 GO:0003824
Aev03g3364 1038 Hamap Histidine--tRNA ligase [hisS]. 602 1035 IPR015807 GO:0004821|GO:0005524|GO:0006427
Aev03g3364 1038 Gene3D Fumarase/aspartase (Central domain) 288 461 - -
Aev03g3364 1038 Pfam Histidyl-tRNA synthetase 609 927 IPR041715 -
Aev03g3364 1038 Pfam Aromatic amino acid lyase 270 392 IPR001106 -
Aev03g3364 1038 TIGRFAM uS19_arch: ribosomal protein uS19 18 138 IPR005713 GO:0003735|GO:0006412|GO:0015935
Aev03g3364 1038 ProSitePatterns Ribosomal protein S19 signature. 104 128 IPR020934 GO:0003723
Aev03g3364 1038 Gene3D - 943 1038 IPR036621 -
Aev03g3364 1038 Gene3D Bira Bifunctional Protein; Domain 2 593 942 IPR045864 -
Aev03g3364 1038 CDD HisRS_anticodon 947 1034 IPR033656 -
Aev03g3364 1038 Pfam Ribosomal protein S19 49 134 IPR002222 GO:0003735|GO:0005840|GO:0006412
Aev03g3364 1038 PRINTS Ribosomal protein S19 family signature 84 103 IPR002222 GO:0003735|GO:0005840|GO:0006412
Aev03g3364 1038 PRINTS Ribosomal protein S19 family signature 116 131 IPR002222 GO:0003735|GO:0005840|GO:0006412
Aev03g3364 1038 PRINTS Ribosomal protein S19 family signature 104 116 IPR002222 GO:0003735|GO:0005840|GO:0006412
Aev03g3364 1038 PANTHER HISTIDYL-TRNA SYNTHETASE 290 1037 - -
Aev03g3364 1038 Pfam Anticodon binding domain 951 1035 IPR004154 -
Aev03g3364 1038 TIGRFAM hisS: histidine--tRNA ligase 606 1024 IPR015807 GO:0004821|GO:0005524|GO:0006427
Aev03g3364 1038 SUPERFAMILY Ribosomal protein S19 54 135 IPR023575 GO:0003735|GO:0005840|GO:0006412
Aev03g3364 1038 SUPERFAMILY Class II aaRS ABD-related 947 1037 - -
Aev03g3364 1038 PANTHER HISTIDYL-TRNA SYNTHETASE 290 1037 - -
Aev03g3364 1038 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 609 944 IPR006195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3364 Aev-Chr3 31357456 31366587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3364 1 138 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 88.406 4.66e-77 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3364 K01892 - gmx:100809535 1189.1