Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3340 ATGGCGACGCCGTTTTCGGGGCTGCAGCACCTGCACGGAGGGGGAGGAGTCGCCATGCTCTCTACCTCCGTTGACAAGGTGGATTCCTCCTCTGCGCTTGACGACGGAGCCGCCGCCGCCATCAAGTGCTCCAAGCTGGACTCCCCGATTTTGATCTTCTTGTTCTTTCACAAGGCGATTCGGAATGAGCTAGACGCGCTGCACCGCCTCGCCATGGCATTCGCCACCGGCAAGCGCTCCGATATCCAGTCTCTCTCCGAGTGCTACCATTTCCTCAGCTCCATGTACAGGCACCACTCCATTGCCGAGGACGAGGTGATTTTCCCAGCTCTAGATATACGTGTCAAGAATGTGGCGCAAACTTATTCTCTTGAACACAAGGGTGAAAGCAATCTTTTTGATCATCTATTTGAGCTATTAAATTCTTCCATCCCTAATGATGAAAGTTTTGCTAGAGAGTTAGCATCCTGCACAGGAGCTTTGCAGACGTCAGTTAGTCAACACATGGCCAAGGAAGAGGAGCAGGTATTTCCTCTGCTTATTGAGAAGTTCTCTGTTGAAGAACAGGCATCCTTAGTTTGGCAGTTTCTTTGCAGTATTCCTGTGAATATGATGGCAGAATTTCTTCCATGGCTTTCAACATCTATATCACCTGATGAATCTCAGGCTTTACAGAACTGCTTAATCAAGATAGTGCCAGAGGAAAAGCTTCTTCAAAAGGTTATTTTCACATGGATGGAAGGGAGAAGTAGTGTTAAAACATTTGAAAGTTGTATAAAACATTCTCAAGTTCAATGTAGTTCTAGCCCATTGTCCCATCAGGTTGAGAAAGCAACCTGTGCTTGTGACTCCACAACAACTGGAAAAAGGAAATATTCTGGATCTGCCCTAGATGCTTCTAGTGCCACTGGTACGCATCCTATAGATGAAATATTGCTCTGGCATAATGCAATAAAAAAAGAGCTAAGTGAGATAGCAGTGGAGACCAGAAAAATACAGCACTCTGGAGATTTTACTAATCTATCAGCATTCAATCAAAGACTGCAGTTCATTGCTGAAGTTTGCATATTTCACAGTATTGCTGAGGACAAGGTCATATTTCCAGCAGTCGATGGAGAACTTTCCTTTTTTCAGGAGCATGCTGAAGAAGAAAGCCAATTTAATGACTTTAGGTGTTTGATTGAAGGTATTCAAATCGAAGGAGCAACATCTAATTCTGCAGTTGATTTTTTTTCAAAGTTATGCTCACATGCTGATCATATAATGGAAACCATACGAAGACATTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCAAGAAAGCACTTTAGCTTTAAAAGGCAACGCGAACTTCTGTATCAAAGCTTATGCATGATGCCTCTGAAATTGATTGAGCGGGTCCTTCCATGGTTGATAGGATCGTTAACGGCAGATGAAGCAAAGATGTTTCTTAGAAACATGCAATTGGCAGCCCCAGCAACAGATTCTGCTCTAGTTGCACTCTTCTGTGGGTGGGCTTGCAAGGCTCGTAATGAAGGCCTGTGTTTGTCTTCTGCTCCATCAGGTTGCTGTCCTGTTCAAAGACTTTCTGATATAGAAGAAAGCATTGTTTGGCCATCCTGTGCTTGTGCTTCTGCATCATCTGGTAGAGATTGCTCCATGTTAGATGAATTAGATGGGAACAAAAGATCAGTCAAGAGAAACTTATTGGAGTTGCACAAGAATGGAGATATGACTGAAACTGCAGAGGCTGAAAGCATCCAGAAACAGTGTTGCAGTGCTCAGTCTTGTTGTGTGCCAGGTTTAGGAGTAAACAGTAACAATTTGGGGCTACTTTCTCTGTCTACAGCCAAGTCCTTACGGTCCTTATCTTTCATCTCTTCTGCCCCATCTCTCAATTCCAGTCTTTTCATGTGGGAAGCAGAGAGAAGCTCATGTGATGTTGGTTCTGCACAAAGACCAATTGATACCATATTTAATTTCCATAAAGCTATACGGAAAGACTTGGAGTATCTAGATGTTGAATCTGGAAAGCTGAGTGACGGTGATGAGACAGTTCTTCGGCAATTTAGTGGACGGTTTCGTCTTTTGTGGGGTTTATATAGAGCTCATAGTAATGCAGAGGATGAGATAGTATTTCCAGCACTGGAGTCCAAAGAAGCACTGCATAATGTGAGTCATTCGTACATGCTGGACCATAAGCAGGAAGAACAATTATTTGACGATATTTCCCGTGTTCTTTCTGAGCTATCTGCCGTTCATGAAGCCTTGCAGATGAGCCGTAAGTCAGAGGATTTAAGTAATTTTGGAAATCCAGGTGCCAAGGGCCGTGATAATATCAAAATGTATAATGAACTTGCAACTAGGCTTCAAGGGATGTGCAAATCCATAAGAGTTACACTGGATCATCATCTTTTCAGGGAAGAGTGTGAACTATGGCCGTTGTTTGGGAAACATTTCACTGTGGAAGAACAAGACAAGATAGTGGGCCGGATAATTGGAACTACTGGTGCTGAAGTCCTCCAGTCAATGTTACCATGGGTAACCTCTGCACTTACTCAAGATGAACAGAACAAAATGATGGACACATGGAAGCAGGCAACTAAGAACACTATGTTCAATGAATGGCTTAATGAATGCTGGAAAGAGAGTCCAGTAGCACCTATACCACAGACAGAAACATCAGATCATAGCACTTCTCAAAGAGGTGCTGAATATCAAGAAAGCATGGAGCTCGATGATCAAATGTTCAAGCCAGGTTGGAAAGACATATTCCGCATGAATCAGAATGAACTTGAGTCAGAGATCCGTAAGGTTTATCGTGACTCAACTCTTGATCCTAGGAGAAAGGCATATCTCGTGCAGAATCTGATGACGAGTCGTTGGATAGCTGCTCAGCAGAAATCACCTAAAGCCTTATCTGAAGAGTCATGTAATAGTGAAGAAATAGAAGGGCAATCACCATCATTTCGGGACCCAGGTAAACATGTATTTGGCTGTGAGCACTATAAGAGAAATTGCAAGCTTCGAGCGGCATGTTGTGGCAAGTTGTTTACTTGCAGATTTTGTCATGACAATGTGAGCGATCACTCCATGGATAGAAAAGCAACATCAGAAATGATGTGCATGCGCTGCCTCAATATACAGCCAATAGGGCCTAAATGCATAACACCTTCGTGTAATGGATTTTCAATGGCAAAGTACTACTGCAATATATGCAAATTTTTTGATGATGAAAGGAATGTATATCATTGCCCATTTTGCAACTTATGCCGTGTTGGACGAGGGCTTGGGATTGATTACTTTCATTGCATGAAATGCAATTGTTGCCTGGGAATAAAATCAACATCACACAAGTGCCTGGAGAAGGGTTTAGAAATGAACTGCCCAATTTGCTGCGATGATTTATTCACATCAAGTGCAACAGTCAGAGCTCTACCTTGTGGCCACTATATGCATTCTGCTTGCTTTCAGGCATACACTTCTAGTCACTACACATGTCCATTCTGCAGCAAGTCATTGGGAGATATGGCGGTTTACTTTGGTATGCTTGATGCGTTATTGGCTGCTGAGGAACTTCCTGAAGAGTATAGGGACCGGTGTCAGGACATCCTCTGCCATGACTGTGATAAAAAGGGCACTTCACGCTTCCATTGGTTATACCACAAATGTGGATCTTGTGGCTCTTACAATACCCGGGTGATTAAGTCCGAGGCACCAAATCCCAGCTGCTCTTAG 3741 0.4322 MATPFSGLQHLHGGGGVAMLSTSVDKVDSSSALDDGAAAAIKCSKLDSPILIFLFFHKAIRNELDALHRLAMAFATGKRSDIQSLSECYHFLSSMYRHHSIAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSSIPNDESFARELASCTGALQTSVSQHMAKEEEQVFPLLIEKFSVEEQASLVWQFLCSIPVNMMAEFLPWLSTSISPDESQALQNCLIKIVPEEKLLQKVIFTWMEGRSSVKTFESCIKHSQVQCSSSPLSHQVEKATCACDSTTTGKRKYSGSALDASSATGTHPIDEILLWHNAIKKELSEIAVETRKIQHSGDFTNLSAFNQRLQFIAEVCIFHSIAEDKVIFPAVDGELSFFQEHAEEESQFNDFRCLIEGIQIEGATSNSAVDFFSKLCSHADHIMETIRRHFHNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLIGSLTADEAKMFLRNMQLAAPATDSALVALFCGWACKARNEGLCLSSAPSGCCPVQRLSDIEESIVWPSCACASASSGRDCSMLDELDGNKRSVKRNLLELHKNGDMTETAEAESIQKQCCSAQSCCVPGLGVNSNNLGLLSLSTAKSLRSLSFISSAPSLNSSLFMWEAERSSCDVGSAQRPIDTIFNFHKAIRKDLEYLDVESGKLSDGDETVLRQFSGRFRLLWGLYRAHSNAEDEIVFPALESKEALHNVSHSYMLDHKQEEQLFDDISRVLSELSAVHEALQMSRKSEDLSNFGNPGAKGRDNIKMYNELATRLQGMCKSIRVTLDHHLFREECELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECWKESPVAPIPQTETSDHSTSQRGAEYQESMELDDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKSPKALSEESCNSEEIEGQSPSFRDPGKHVFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMRCLNIQPIGPKCITPSCNGFSMAKYYCNICKFFDDERNVYHCPFCNLCRVGRGLGIDYFHCMKCNCCLGIKSTSHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSACFQAYTSSHYTCPFCSKSLGDMAVYFGMLDALLAAEELPEEYRDRCQDILCHDCDKKGTSRFHWLYHKCGSCGSYNTRVIKSEAPNPSCS* 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3340 1246 CDD Hr-like 309 438 - -
Aev03g3340 1246 SUPERFAMILY RING/U-box 1128 1175 - -
Aev03g3340 1246 Coils Coil 556 576 - -
Aev03g3340 1246 SUPERFAMILY CHY zinc finger-like 996 1057 IPR037274 GO:0008270
Aev03g3340 1246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1126 1174 IPR013083 -
Aev03g3340 1246 ProSiteProfiles Zinc finger CTCHY-type profile. 1066 1129 IPR017921 -
Aev03g3340 1246 SMART ring_2 1130 1171 IPR001841 -
Aev03g3340 1246 Gene3D - 1201 1241 - -
Aev03g3340 1246 CDD RING-H2_Pirh2 1129 1172 - -
Aev03g3340 1246 ProSiteProfiles Zinc finger CHY-type profile. 994 1063 IPR008913 GO:0008270
Aev03g3340 1246 Pfam Ring finger domain 1129 1171 IPR001841 -
Aev03g3340 1246 Pfam Zinc-ribbon 1177 1234 IPR039512 -
Aev03g3340 1246 Pfam CHY zinc finger 1001 1076 IPR008913 GO:0008270
Aev03g3340 1246 PANTHER CHY ZINC FINGER PROTEIN 33 1245 - -
Aev03g3340 1246 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 33 1245 - -
Aev03g3340 1246 SUPERFAMILY Zinc hairpin stack 1067 1123 IPR037275 -
Aev03g3340 1246 Gene3D nmb1532 protein domain like 309 456 - -
Aev03g3340 1246 Gene3D nmb1532 protein domain like 46 198 - -
Aev03g3340 1246 CDD Hr-like 657 815 - -
Aev03g3340 1246 Pfam Hemerythrin HHE cation binding domain 54 180 IPR012312 -
Aev03g3340 1246 Pfam Hemerythrin HHE cation binding domain 306 440 IPR012312 -
Aev03g3340 1246 Pfam Hemerythrin HHE cation binding domain 655 816 IPR012312 -
Aev03g3340 1246 ProSiteProfiles Zinc finger RING-type profile. 1130 1172 IPR001841 -
Aev03g3340 1246 CDD Hr-like 52 178 - -
Aev03g3340 1246 Gene3D nmb1532 protein domain like 651 888 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3340 Aev-Chr3 31193937 31201420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3340 1 1246 C2H2 Transcription Factor Family AT3G18290 66.561 0.0 1672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3340 K16276 - gmx:100803002 2184.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3340 03 31193937 31201420 Aev05g3440 05 33830847 33838736 PCT