Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3333 ATGGCTGAATTCACAGCAGATTTTCAAAGTTTTAGACCCTCTTTTCCTTTCATAGACATTGATTGCATGGAACTGACAAACCAGTTCAAAGGGGTAGTGAATCCAAACATCCTAAACAACTCAAATTTGAACATGCAGAACTTGATGCCTTTCACCTGTGACAACAGCTACATCGGTTCTCCAGAACCTGATGATTTTTCAGGAAACTTGGAACAGAAATTTTCAGGCCTTGCCCATTATGTTAATCACTATGCTGTTCCAGTTTCAAATCCCAATTCTTCAGTAGAAAATGAAATCCAAGAAGGTAGAAAGAGGAAAGCAACAACAGATATGTCAGACACTATGTCAGCAAACTCAACCCCTGCAGTTTCTGAGAGTGGAAGCAAGACAAAAAATAATTCAGGAAGAAGTAAGAGAGTAAAAAGGAGTGAAACAGAAGAGAAGAAGAAACCAATGGAAGTAGTTCATGTCAGAGCTAGAAGAGGTCAAGCTACTGATAGTCACAGTTTGGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAAAAACTTAAGTGCTTACAGAACATTGTCCCAGGATGTTACAAGACCATGGGCATGGCAATAATGTTGGATGAGATCATAAATTATGTGCAGTCCTTGCAGCATCAAGTGGAGTTCCTCTCTATGAAGCTAACTGCAGCAAGTGCATTTTATGACTTCAACTCAGAGACAGATGCTTTAGAAACAATGCAGAGAGAAAGGGCATCCGAGGCAAAAGAGTTGGCAAAGTGTGTGAAAGGAGGGTATGGATATGGAGCAGATTCTTGCTGCTTCCAACCAACGTGGCCTTGGTCCCTTTGA 840 0.4083 MAEFTADFQSFRPSFPFIDIDCMELTNQFKGVVNPNILNNSNLNMQNLMPFTCDNSYIGSPEPDDFSGNLEQKFSGLAHYVNHYAVPVSNPNSSVENEIQEGRKRKATTDMSDTMSANSTPAVSESGSKTKNNSGRSKRVKRSETEEKKKPMEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASAFYDFNSETDALETMQRERASEAKELAKCVKGGYGYGADSCCFQPTWPWSL* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3333 279 MobiDBLite consensus disorder prediction 88 153 - -
Aev03g3333 279 Gene3D - 163 225 IPR036638 GO:0046983
Aev03g3333 279 SMART finulus 169 219 IPR011598 GO:0046983
Aev03g3333 279 MobiDBLite consensus disorder prediction 111 133 - -
Aev03g3333 279 Pfam Helix-loop-helix DNA-binding domain 167 214 IPR011598 GO:0046983
Aev03g3333 279 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 274 IPR024097 GO:0006355
Aev03g3333 279 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 213 IPR011598 GO:0046983
Aev03g3333 279 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 231 IPR036638 GO:0046983
Aev03g3333 279 PANTHER TRANSCRIPTION FACTOR BEE 1 2 274 - -
Aev03g3333 279 MobiDBLite consensus disorder prediction 137 153 - -
Aev03g3333 279 CDD bHLH_AtBPE_like 153 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3333 Aev-Chr3 31154918 31156445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3333 1 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 46.939 1.65e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev03g3333 HLH 9.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3333 - - aprc:113855800 364.385