Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3321 ATGCAGGATGTGAAGAAATGTAGGAAGAAAAGAACACAAAGGGTTCCAATAAGAAAAGAGAGAATGAAACATTACTACAGGAAACTCAGAATCATATGGAGTGATCCACATGATACAGAGTCTTCAAGCGACGAAGATGATATTGACGAGCCTTCGAGCAATAATGATGGCTCCAAACCAAAGGGTTCCGTGAAGCAAGAAGAAGAAAGGACCAAAGTAGCAGATCCCAGATTTTATCGAAGCAAAGGGCAAAACACATTCAGCATGTACAGAGGCGTTCGACGCAGGGATTCAGGGAAATTTGCTGCAGAAATTCACGACCCATTTCGCGGGTGCCGCCTGTGGCTTGGAACTTTTGATACTGAAGAAGAGGCTGCTATGGCTTACACCACACAGAGGAATGAGTTTGAACGGTTACTGTTAGCTATGCAGAGTGATAAACAACCTATCTCCTCTGCTTCTACTAATCAAGAAGAAGCTTCATCATCGGTGCTGCTAGGTGCGGGAAGTAGTAGTGATGGAGGCAACAGCAACATGATGATGGAAACAGGTGGTGGTGGTGTTGTGAAGCCGCCGCCAGTTTGTGACGACGATGAGTTTCAGTCAGTGATGCAGTCGTTGGACGATCCAGTTGCGCCGTCATTGTTTGCTGCTACTGGTGACTTCATCAATTTTGAGGAATTGATGTTCGCCGGTGAATTCTTTGACAATGTCCCTGATGATGATGATCATA 733 0.4529 MQDVKKCRKKRTQRVPIRKERMKHYYRKLRIIWSDPHDTESSSDEDDIDEPSSNNDGSKPKGSVKQEEERTKVADPRFYRSKGQNTFSMYRGVRRRDSGKFAAEIHDPFRGCRLWLGTFDTEEEAAMAYTTQRNEFERLLLAMQSDKQPISSASTNQEEASSSVLLGAGSSSDGGNSNMMMETGGGGVVKPPPVCDDDEFQSVMQSLDDPVAPSLFAATGDFINFEELMFAGEFFDNVPDDDDH 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3321 244 MobiDBLite consensus disorder prediction 1 20 - -
Aev03g3321 244 SUPERFAMILY DNA-binding domain 88 134 IPR016177 GO:0003677
Aev03g3321 244 PANTHER CYTOKININ RESPONSE FACTOR 5-RELATED 9 166 - -
Aev03g3321 244 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Aev03g3321 244 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Aev03g3321 244 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Aev03g3321 244 MobiDBLite consensus disorder prediction 36 77 - -
Aev03g3321 244 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 9 166 - -
Aev03g3321 244 CDD AP2 88 129 IPR001471 GO:0003700|GO:0006355
Aev03g3321 244 Gene3D AP2/ERF domain 89 138 IPR036955 GO:0003700|GO:0006355
Aev03g3321 244 MobiDBLite consensus disorder prediction 147 186 - -
Aev03g3321 244 MobiDBLite consensus disorder prediction 61 77 - -
Aev03g3321 244 SMART rav1_2 89 164 IPR001471 GO:0003700|GO:0006355
Aev03g3321 244 Pfam AP2 domain 90 137 IPR001471 GO:0003700|GO:0006355
Aev03g3321 244 MobiDBLite consensus disorder prediction 147 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3321 Aev-Chr3 31096236 31096968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3321 6 165 AP2-EREBP Transcription Factor Family AT1G68550 34.807 3.69e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev03g3321 AP2 1.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3321 - - aprc:113866790 94.3597