Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3300 ATGAAGAACGAAGCTTACTCCTCCTCCAATCTTTGCCTCTTCCTCCTTGTTGCCGTTTTTGCAGGCACATTCTCACTCTGTGCCTCCAATCCCATAAATGACAGTGGAGCGCTCACCGACGCACAAGCATTGTACATCAGACAGCGACAGCTTCTCTACTACAGGGACGAGTTCGGCGATAGGGGAGAGGAGGTCACTGTAGACCCTTCTCTTGTCTTCGAGAATGATCGTATCAGGAACGCTTACATAGCCTTGCAAGCTTGGAGGCAAGCTATTCTCTCTGATCCTCTTAACTTCACAGCTAATTGGGCTGGATCCGACGTTTGCAACTACACCGGAGTTTACTGTGCTCCCTCACTCGACAACCCCACGATCCGCACTGTTGCTGGCATTGATCTTAATCATGCTGACATTGCTGGTTATTTGCCCGAAGAACTTGGTCTCTTGGTGGATCTTGCTCTGTTCCATATCAACTCCAACAGGTTCTGTGGCACATTGCCTCATAGGTTCGAGAGACTGAGGCTGTTGTTTGAACTGGATATCAGTAACAACAGGTTTGCAGGGAGGTTTCCAGAGGTGGTTTTGAGGCTTCCCACTCTCAAATTCTTGGATCTCAGATTCAACGAGTTCGAAGGGTCAGTTCCCAGAGAGCTCTTTGACAAGGATCTTGATGCCATCTTTATCAATGACAACCGTTTCGTGTTTGATCTTCCTGACAACTTGGGGAACTCTCCTGTTTCCGTCATTGTCCTTGCCAACAACAGGTTCCACGGATGCATTCCGGCGAGCATTGGTAACATGTCGAATCTGAACGAGATCATCCTTATGAACAATGAGTTTAGGGCGTGCTTGCCTTCTGAGGTTGGGTTGCTGAAGAATCTGACCGTGTTTGATGTTAGCTTCAACCAGTTATTGGGTCCCCTGCCTGATGCCATTGGAGGAGCTGTGAGTCTGGAGCAGTTGAATGTTGCTCACAATCTTCTGTCGGGGAAGATTCCGGATAGCATATGCATGTTGCCCAATCTGCAGAACTTCACTTATTCTTCCAACTTCTTCACGGGAGAGCCACCGTCGTGCCTGAGGTTGCCGTCGTTTGATGACAGGAGAAATTGCTTGCCGGCAAGGCCGCAGCAGAGGTCTGGGGCGGAATGTAACTCGTTCTTGTCCAAGCCTGTGGATTGTAGCTCATTTGGGTGTAAGCCATTTGTTCCTTCTCCTTCGCATCCTCCTTCTCCTCCTGGAGGGGGATCTGCGCCTCCACCGGGTGTTGTGGTTCCTTCACCGCCATCTGGGGTGGCTCCGGTGCCTTCTCCTTCTTCACCACCTGTTGTTACACCACCCTCACCGTCTATTCCTTCGCCACCCTCACCACCTGGGCAAGGTCCTTCCCCACCAGTGGTTACACCACCGACACCGTCTACTCCTTCTCCACCTGGGCAAGGTCCTTCCCCACCAGTTGTTACACCACCGACACCGTCTACTCCTTCACCACCTGGGCAAGGGCCTTCACCTGGTTATACACCGCCACCGTATCCAACTCCATCACCGCCACCAGCGGCACCGTCACCTTTGCCACCTGGCTATACACCACCATCTCATCCCCCATCACCTGTAGTGGTGCCTTCACCTCCGTCCCCTGTTTACAATCCACCACCGCCTGCAGTCTCCTCCCCTCCACCGATGTACTCACCCCCATCACCTCCACCACCAGTGTACCTACCACCACCACCTCCGCCGCCACCACCACCACCACCACAGGTCTATTATCCACCACCCTCTCAGCCCTCGCCAACACCAGCGCCACCATACTGTGTCCGATCTCCACCACCGCCACCACCAGCTCCAGTATTCTCCCCACCACCACCTTCACCTTACTATTATAGCTCCCCGCCTCCTCCCACTCATTCGCCTCCACCCCCTCCTCACTCACCCCCTCCACCCGTTTATCCCTATTTATCACCACCGCCTCCACCACCAGCCCATTCCCCACCTCCACCACCAGTCCATTCCCCACCCCCACCATCTCCACCACCATGCATAGAACCTTCTCCACCCCCACCACCTTCTCCCACTCCCACGCCTTACCTCCCGCCACCATCCCCGTCACCCCCACCCCCACCGGTTCACTATAGCTCACCTCCTCCTGCTCCAGTCCACTATAATTCCCCACCACCCCCTCCTCCAGTTCACTATAATTCTCCGCCACCTCCTCCGGTTCACTATAGTTCCCCTCCCCCACCCCCTGTCTATTACAGTACACCACCGCCACCCCCTGTCCACTACAGTTCTCCCCCGCCGCCTCCATCATCACCACCTCCATATGAAGCTCCACCTTCTCCGTCGCTACCACCACCGGCCCCTGTATATCAAGGGCCATTGCCACCTATCATCGGAGTCCCATACGCATCGCCTCCACCGCCACCTTACTATTGA 2433 0.5454 MKNEAYSSSNLCLFLLVAVFAGTFSLCASNPINDSGALTDAQALYIRQRQLLYYRDEFGDRGEEVTVDPSLVFENDRIRNAYIALQAWRQAILSDPLNFTANWAGSDVCNYTGVYCAPSLDNPTIRTVAGIDLNHADIAGYLPEELGLLVDLALFHINSNRFCGTLPHRFERLRLLFELDISNNRFAGRFPEVVLRLPTLKFLDLRFNEFEGSVPRELFDKDLDAIFINDNRFVFDLPDNLGNSPVSVIVLANNRFHGCIPASIGNMSNLNEIILMNNEFRACLPSEVGLLKNLTVFDVSFNQLLGPLPDAIGGAVSLEQLNVAHNLLSGKIPDSICMLPNLQNFTYSSNFFTGEPPSCLRLPSFDDRRNCLPARPQQRSGAECNSFLSKPVDCSSFGCKPFVPSPSHPPSPPGGGSAPPPGVVVPSPPSGVAPVPSPSSPPVVTPPSPSIPSPPSPPGQGPSPPVVTPPTPSTPSPPGQGPSPPVVTPPTPSTPSPPGQGPSPGYTPPPYPTPSPPPAAPSPLPPGYTPPSHPPSPVVVPSPPSPVYNPPPPAVSSPPPMYSPPSPPPPVYLPPPPPPPPPPPPQVYYPPPSQPSPTPAPPYCVRSPPPPPPAPVFSPPPPSPYYYSSPPPPTHSPPPPPHSPPPPVYPYLSPPPPPPAHSPPPPPVHSPPPPSPPPCIEPSPPPPPSPTPTPYLPPPSPSPPPPPVHYSSPPPAPVHYNSPPPPPPVHYNSPPPPPVHYSSPPPPPVYYSTPPPPPVHYSSPPPPPSSPPPYEAPPSPSLPPPAPVYQGPLPPIIGVPYASPPPPPYY* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3300 810 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 11 536 - -
Aev03g3300 810 MobiDBLite consensus disorder prediction 758 789 - -
Aev03g3300 810 MobiDBLite consensus disorder prediction 628 742 - -
Aev03g3300 810 PRINTS Proline rich extensin signature 454 471 - -
Aev03g3300 810 PRINTS Proline rich extensin signature 434 450 - -
Aev03g3300 810 PRINTS Proline rich extensin signature 473 498 - -
Aev03g3300 810 PRINTS Proline rich extensin signature 401 422 - -
Aev03g3300 810 Gene3D Ribonuclease Inhibitor 81 245 IPR032675 -
Aev03g3300 810 SUPERFAMILY L domain-like 83 365 - -
Aev03g3300 810 MobiDBLite consensus disorder prediction 405 608 - -
Aev03g3300 810 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 11 536 - -
Aev03g3300 810 Gene3D Ribonuclease Inhibitor 246 378 IPR032675 -
Aev03g3300 810 Pfam Leucine rich repeat N-terminal domain 84 116 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3300 Aev-Chr3 30939493 30941925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3300 38 467 Leucine-rich Repeat extension Gene Families AT3G24480 67.285 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3300 - - gmx:100814585 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3300 03 30939493 30941925 Aev03g3300 03 30939493 30941925 ECH