Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3284 ATGATGCAGTCTCTCTCAGTAACGAAGATGCCATCCCTCTCTATCTCCTCACCTCTGCCATCGCTTCAAAACCCAAACTTGGACCATACCCACCTCTTCAAATTCATCAAAACCTCAAATTTAGGGTTCACTTCATCACCACACTGTCACTGCCACTTCTCTCACCTCCCAAAAGCCACTCTCTCTCTTCGCCGTAGGATACAGAACCGCAGGGTTCATTGCAATGTTTTGAAGGATCCCGACGAAGACGTTAAGGCGGTGTTGGACTCCAACAGCGGGGATGGAGGAGGAGGTGGTGGCGACGGTGGGGATGAGAGAGAGGTGGAGAAAAAAGAAGGGCCTTTCCCAGAATGGTTGAATTTCACTTCTGATGACGCAAAAACGGTGTTTGCAGCTCTGGCTATATCGCTTGCGTTTCGTACCTTCATAGCTGAGCCGAGGTACATTCCTTCGCTGTCAATGTATCCTACGTTTGATGTTGGAGATCGACTTGTTGCTGAAAAGGTTTCATACTACTTTAGAAAGCCGTGTGCAAATGACATAGTGATATTCAAGAGTCCTCCTGTGCTTCAAGAAGTTGGATATACTGACGACGATGTTTTTATAAAACGGGTGGTTGCAAAGGAAGGGGATATTGTTGAGGTTCGTAAAGGGCGTCTTATAGTTAATGGGGTTGAGAGGAATGAGAAGTTCATCCTTGAACCACCTTCCTATGAGATGAAACCCATACGTGTGCCGGAGAATTACGTTTTTGTGATGGGAGACAACCGCAATAACAGCTATGATTCCCACGTCTGGGGTCCCTTGCCAGCCAAGAACATTATAGGTCGGTCAGTATTACGCTATTGGCCACCAAACAGAGTAGCCAGCACTGTCTCTAAGGAAACTTGTCCTGTTGAAACCAGGCAGGAAGAGTCTACAATGGCATCCCAATGA 936 0.4701 MMQSLSVTKMPSLSISSPLPSLQNPNLDHTHLFKFIKTSNLGFTSSPHCHCHFSHLPKATLSLRRRIQNRRVHCNVLKDPDEDVKAVLDSNSGDGGGGGGDGGDEREVEKKEGPFPEWLNFTSDDAKTVFAALAISLAFRTFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDIVEVRKGRLIVNGVERNEKFILEPPSYEMKPIRVPENYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVLRYWPPNRVASTVSKETCPVETRQEESTMASQ* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3284 311 MobiDBLite consensus disorder prediction 85 109 - -
Aev03g3284 311 ProSitePatterns Signal peptidases I serine active site. 151 158 IPR019756 GO:0004252|GO:0016021
Aev03g3284 311 SUPERFAMILY LexA/Signal peptidase 140 289 IPR036286 -
Aev03g3284 311 PANTHER SIGNAL PEPTIDASE I 106 294 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aev03g3284 311 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 106 294 - -
Aev03g3284 311 Pfam Signal peptidase, peptidase S26 126 283 IPR019533 GO:0004252|GO:0006465
Aev03g3284 311 ProSitePatterns Signal peptidases I signature 3. 250 263 IPR019758 GO:0004252|GO:0016021
Aev03g3284 311 PRINTS Bacterial leader peptidase 1 (S26A) family signature 201 213 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aev03g3284 311 PRINTS Bacterial leader peptidase 1 (S26A) family signature 245 264 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aev03g3284 311 PRINTS Bacterial leader peptidase 1 (S26A) family signature 142 158 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aev03g3284 311 TIGRFAM sigpep_I_bact: signal peptidase I 127 285 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aev03g3284 311 MobiDBLite consensus disorder prediction 1 21 - -
Aev03g3284 311 Gene3D Umud Fragment, subunit A 139 300 - -
Aev03g3284 311 CDD S26_SPase_I 145 277 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3284 Aev-Chr3 30854661 30856303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3284 154 284 MADS-box Gene Family AT1G29960 33.835 1.34e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3284 K03100 - gmx:100815810 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3284 03 30854661 30856303 Aev03g3284 03 30854661 30856303 ECH