Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3280 ATGGGGGAAGGAGAAAGTGGCGATTTTCCTCTGATTAATGTGTCGTCTGATGGTTCTGCGATGACGCCCTCCGATGTTCCCACCAAGAAGCTAGCCAGGCAGCTCGATTTCACTGGCTTTGGTGGTGCGCCTTTGTCGGAGCATCCGCAGTTGCATAAGCAGCAGCAGCAGCAGCAGCAGCAGCTTCAGCTTCAGCCGCAGGTGGTGGCGCAGAGTCAGCACCAGTTACAGCCACAGCCACCACAGACACTCGCGCAGCCTGTGGTTTTGATGCCCATGCCGCTTCAGCCGCAGGCACCACACCCTTCAGTGAGGGTTAGTAAAACAGACTCTCCGAAACCAAGGTCAAGGTCCAACTTTGAAATGAAAGATGCTACTCCAAAGAAGCAGAAGCAATGCAATTGTAAACACTCAAAGTGCTTAAAGCTATATTGTGAATGTTTTGCGTCAGGAATATATTGTGATGGTTGCAACTGTGTAAATTGTCATAACAATGTTGAAAATGAAGCTGCTAGAAGAGACGCTGTTGAATCTACTTTAGAACGTAATCCAAATGCATTTAGGCCGAAAATTGCAAGCAGCCCTCATGGACCACGTGACAGCAGGGAGGAGGCTGGGGAAATTTTAATATTGGGAAAGCACAACAAGGGATGCCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCTAACATTCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAGGCACTGTTCCATGGAGATCAAAATAACAACATGGCATATATTCAGCAGGCAGCAAATGCTGCAATAACTGGAGCTGTTGGTTCCTCTGGTTATACATCACCACCAATATCGAAGAAAAGAAAAGGTCAGGAACTCTTCTTTGGGCCAATAGCCAAGGATCCATCCGTTGGCAGGCTGGGACAACAGGCAAACCATGTCAAAGGCCCTGCACCCTCCTCGCCCTTGCCATCTGTTCCAAGTGCTCGTGTTGGAACTACACCATTAGGTCCTTCAAAATTATCGTACAGGTCTCTATTGGCAGACATAATACAACCACAGCACCTAAAGGAGCTTTGCTCAGTTCTGGTGCTAGTGTCTGGACAAACTGCAAAGACATTAACAGACCAGAACAATTTAATGGATAAGCATAAAGAAGAGCAGACAGAAACATCCCTTGCTTCTTCAACTCAAGAGCAATTACCAAGCCAAAAGAGAGTTGATGTTGAAAAAGCTACAGCTGATGATTGTTCAAGTGAAAACCAATTAGATAATTCTAGTTCAGATGGTGCTGATGTCCCTAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTAATGTGCTATGAGCCAGATACAATGTTCATGACTGGTGCCCCCCCTAATGGATCAATTGCCCATGCTTCCAACACATCTTCTCAGTTGCCTAATGGACAAGAAATGACGGAGGTTTATGCAGAGCAAGAAAGGATTGTTTTGACGAAGTTCAGAGATTTTCTTAATGGAGTTATCACTATGGGAGAAATTAACGAAACCAAGTGTTCTTCATTAGCCAGAAGTCAATTAGATAGTCAAAAGGACCCAATCATCAATGGCACTGGAAATGCCAGCACTGAGACGGCACGTCAGGGAGCCATTAGTAATGGCGTCGCCAAAGATGTTATCCATCCCATGGCAACAAGTATGAGTGTGAGCACTTCAATCCCTCTGGTTCATAGTAATCTTGTTCATGAAAATGGCGAAACTAAGCTGAAGGTCAATAAAGAGACATGA 1803 0.4509 MGEGESGDFPLINVSSDGSAMTPSDVPTKKLARQLDFTGFGGAPLSEHPQLHKQQQQQQQQLQLQPQVVAQSQHQLQPQPPQTLAQPVVLMPMPLQPQAPHPSVRVSKTDSPKPRSRSNFEMKDATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCHNNVENEAARRDAVESTLERNPNAFRPKIASSPHGPRDSREEAGEILILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAVGSSGYTSPPISKKRKGQELFFGPIAKDPSVGRLGQQANHVKGPAPSSPLPSVPSARVGTTPLGPSKLSYRSLLADIIQPQHLKELCSVLVLVSGQTAKTLTDQNNLMDKHKEEQTETSLASSTQEQLPSQKRVDVEKATADDCSSENQLDNSSSDGADVPKGRPMSPGTLALMCYEPDTMFMTGAPPNGSIAHASNTSSQLPNGQEMTEVYAEQERIVLTKFRDFLNGVITMGEINETKCSSLARSQLDSQKDPIINGTGNASTETARQGAISNGVAKDVIHPMATSMSVSTSIPLVHSNLVHENGETKLKVNKET* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3280 600 MobiDBLite consensus disorder prediction 318 343 - -
Aev03g3280 600 MobiDBLite consensus disorder prediction 387 449 - -
Aev03g3280 600 PANTHER TESMIN/TSO1-RELATED 22 578 IPR028307 -
Aev03g3280 600 MobiDBLite consensus disorder prediction 176 202 - -
Aev03g3280 600 ProSiteProfiles CRC domain profile. 129 253 IPR005172 -
Aev03g3280 600 MobiDBLite consensus disorder prediction 108 124 - -
Aev03g3280 600 SMART CXC_2 128 168 IPR033467 -
Aev03g3280 600 SMART CXC_2 213 254 IPR033467 -
Aev03g3280 600 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 216 250 IPR005172 -
Aev03g3280 600 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 130 165 IPR005172 -
Aev03g3280 600 MobiDBLite consensus disorder prediction 49 81 - -
Aev03g3280 600 MobiDBLite consensus disorder prediction 1 81 - -
Aev03g3280 600 MobiDBLite consensus disorder prediction 93 124 - -
Aev03g3280 600 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 22 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3280 Aev-Chr3 30828655 30833009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3280 1 542 CPP Transcription Factor Family AT4G29000 52.870 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aev03g3280 TCR 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3280 - - gmx:100777698 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3280 03 30828655 30833009 Aev03g3280 03 30828655 30833009 ECH