Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3278 ATGGATACGGAGCCTCCATCGAAGAGCTGGAGCATCCATACCCGATCCGAAATCATCTCAAAGTACCAAATCTTGGAGCGGGTCGGGTCTGGAGCCTATGCCGACGTCTACCGTGGGCGCCGCCTCTCCGACGACCTCACCGTCGCCCTCAAGGAAATCCACGACTACCAGTCCGCCTTCCGTGAAATCGAGGCTCTCCAGATGCTTCAGGGATCCCCAAACGTCGTCGTCTTGCACGAGTACTTCTGGCGTGAGGACGAGGACGCTGTGCTCGTCCTTGAGTTCCTCAGAACCGACCTCGCCACCGTCGTCGCCGAAGCACGCAAGGACAAGGGCCTCCCTGTCGCCGAGATGAAGAGGTGGATGATCCAGATTTTGTGCGGTGTTGACGCCTGTCACCGCAACATGATCGTGCATCGCGATTTGAAGCCTGGTAATCTCTTGATCTCCGATGACGGTGTCCTCAAACTGGCAGATTTTGGACAGGCAAGGATACTTACAGAGCCTGGATTTGATGCATCTGAGGAGAACCCACCACCATACGAACATGATAGTACTAATCATGAAAGTTCACTCCAAGACCCTGTAGCTTTTCCCTTGGCGGCCAATGTAAGCCAAGGAGGGCATGGAAATCAGGAGCAGGGAACTGTCCTTCATGAGGACTATTTTAGAGTCTTAGATGAACTGAAAACAAAGCGCTCCACAGATGACGTCGAGAAAGACACAAGCATTCCTGATGGAAATACTTCTTGTCTTGCAACATACACTGCAAGTGATATAGATGATGACCCTTTAAAAACCAATTTTAGTTATGAAGCTAGGGAGGACGACGGTGAAGAACTCGGTTGTCTCACATCATGCGTTGGCACTCGTTGGTTTAGGGCTCCTGAGTTACTTTATGGATCAACAAACTATGGTTTAGAGATTGATCTTTGGTCATTGGGATGTATATTTGCAGAGCTCTTTACTCTAGAGCCCTTATTTCCTGGGACAGCTGATATTGATCAGCTGAGCAGAATTATTAGTGTTCTGGGTAACCTCGATGAGAATGCTTGGCCTGGTTGTTCTAAACTTCCTGATTATGGAATAATCAATTTTAGTAAGGTGGAAAAACCTGTTGGTCTTGAAGCCTGCATGCCCAGCCGCACCCCGGATGAAGTGTCTCTTGTGAAAAAACTGGTTTGTTACGATCCGGCCAGGAGAGCGACGGCAATGGAGCTCCTACATGACAAGTACTTTAATGAAGAGCCTCTTCCTGTTCCTGTTTCTGAGCTGCGTGTACCTCTGAACAGAAAGAGAGAAGACGAAGACTCCCTCGGAGGGTGGCATGATTACAATGAGATGGATTCTGATTCTGATTTTGATTTTGATGATTTTGGCCCTGCGAATATCACCAGAACTGCTACCGGTTTCTCCATGCAGTTTCCTTGA 1431 0.4878 MDTEPPSKSWSIHTRSEIISKYQILERVGSGAYADVYRGRRLSDDLTVALKEIHDYQSAFREIEALQMLQGSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVVAEARKDKGLPVAEMKRWMIQILCGVDACHRNMIVHRDLKPGNLLISDDGVLKLADFGQARILTEPGFDASEENPPPYEHDSTNHESSLQDPVAFPLAANVSQGGHGNQEQGTVLHEDYFRVLDELKTKRSTDDVEKDTSIPDGNTSCLATYTASDIDDDPLKTNFSYEAREDDGEELGCLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQLSRIISVLGNLDENAWPGCSKLPDYGIINFSKVEKPVGLEACMPSRTPDEVSLVKKLVCYDPARRATAMELLHDKYFNEEPLPVPVSELRVPLNRKREDEDSLGGWHDYNEMDSDSDFDFDDFGPANITRTATGFSMQFP* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3278 476 Gene3D Transferase(Phosphotransferase) domain 1 11 193 - -
Aev03g3278 476 MobiDBLite consensus disorder prediction 169 191 - -
Aev03g3278 476 SMART serkin_6 22 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g3278 476 Pfam Protein kinase domain 22 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g3278 476 Pfam Protein kinase domain 284 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g3278 476 ProSiteProfiles Protein kinase domain profile. 22 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g3278 476 Gene3D Transferase(Phosphotransferase) domain 1 251 427 - -
Aev03g3278 476 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Aev03g3278 476 PANTHER CELL DIVISION PROTEIN KINASE 13 432 - -
Aev03g3278 476 SUPERFAMILY Protein kinase-like (PK-like) 9 428 IPR011009 -
Aev03g3278 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Aev03g3278 476 PANTHER CYCLIN-DEPENDENT KINASE 10 13 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3278 Aev-Chr3 30819125 30821021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3278 1 476 Core Cell Cycle Gene Families AT4G28980 62.319 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Aev03g3278 Pkinase 3.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3278 - - mtr:MTR_8g103240 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3278 03 30819125 30821021 Aev05g3351 05 33163381 33164906 PCT