Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3276 ATGGCCACCGCAACCGCTACCACGACCTCTTCTCACATCCTCCGCCACACCACAGCGTTCACCTCCGTCGTACTATCGCAATCGGAGCTCCGGCGCCACCTCGTTGCCACTCTCCTCCGCGAGTGCCCAATCTCCGACCAAGCCACCCTCAAACACCTCAAACTCGCCGCCGAAACCGTCGAAAACGCCATCACATTCTCCAGCGCTGCCGTCCGCGCCTCTTCCGTCCGCCTCGCTGAGAAGCTCCTCCTTCCTCTCCCCGAACTTCCGCTCTCCTCCTTCCTCCACTCCCTCGTGCTCGCCCTCTCCAACCGCACCGTAGATTCCGCCATAAGGCTCATCCGAATCTTCAACTCCACACCTTCCCTCGCCAGATCCGAAGTCGCGCCGAATCTCTACGAACACCTCTTTTCTCTCCACCTGCTCCCTGTTTTCCGGTGGTTCGATGAGAAGAGAACGCAAGTTTTGTCCAATTCGAGTGGCGACGATGCAAGTGAGTATGACTATTCGGTTACGGAGGAGTCGGTGGTGCTGCCGTGCGCGAAACTGCTGTCGAGGATGAGCGGGGATCAGGCTTCGAAGCTGAGGGAACTGGAGAGAGAGTACGAAGAGGCTCTCGACGAGAATTGCAGGGTTGTTGCGGCGTATTTCGAAGAGGTTCTGGTGAGTGAAAGCGGAAGCGCGTCGATTACTCCGCCATTGTTGATGCTGAAGAGCGCCGAAGAAGGAGATGGAAGGAAGAACAAAGAGGAGATTGAAGAAACCGAAATGCCTGTGTTTGAGAACGGACGGTATAATCCAATGTGGTCCGAAAGGGAAACATCTATTGAATTTATGAGCAACACTTGCAGCAGCAAATCCTCGCCCACACCCTGTTATCCTCAAAGAGTCTCTCCCAAAATCCTCAAACGCCAAAAATCATCCAAAACTTGGACAGCAGCAGTCCATTTAAAACCAACCATTGAAACGGAATCTTCTTCTTCAGATTCTGAAGCAGAAATTGAGGAAAAGGACAAAAATGTGGCATTGTTGGAGAAGCCTCGACAGAGCCAAACTCAAGAACAAGTGCAAACCATGTTCAAAGAATCAAGGGGTTCCCCAGATAGCCCTATGGCAGAGTGCGATAACCCGCCGCATGGAAGTGGAAAACATACACCTCCCAAGGACTTTGTCTGTCCAATAACTAGCAACATATTTGATGATCCTGTGACTCTTGAGACAGGGCAGACATATGAACGTAAAGCTATAGAGGAATGGTTCAAAACTGGGAACTCAACTTGTCCCATCACTCGCCAGAAGTTGCAGAACACTCAGTTACCTAAAACAAATTATGTGCTCAAACGACTAATTGCAAGCTGGAAAGAACAGAACCCCAATTCAGTCCCGCTGCCATGTGAGAGTCCTTATGAAGATACGGAGGCAGTGCCGAATTCAACAAAGATTTCAACTTCACCTAAAGATTTTGTAACACAAGCCACCGTTGATGGGATGATTAGTGAGTTGCGCAATGCAATCAATAACCTGTATATGTCAGAGATTCTTGAGGAATCTGAAATGGCTGTGCTTCATGTAGAGAAGATGTGGAGAGGAGTGAAACTAGGAGTCGATATCCATAGCATGCTATCAAAACCTCCGATAATTAATGGTTTTATGGAGATCCTTTTCAATTCTGTTCAGCCCCAGGTGCTGCAAGCTGCAGTTTTCCTTCTGGCCGAGATGGGCTCAAAAGACCATGCTGTTATTCAGACGCTTACGCGTGTGGACACTGATGTTGAATGTGTCATGGCTCTTTTTAATAAAGGGTTGATAGAGGCTGTTGTGCTGCTATATCTTCTAAAACCTTCCACTGCGAGTCTTGCTGAGATCGTCACGCCGGAGTCTCTCATAGCAGTATTCAATGAGAAAGAGGATGACTTGGTTAAGATGTGTTTGAAGCCCAAAACAGCTGCCTTGCTTTTACTGGCACAGATTATTGGAGGCGGTGAAGAGAGACTTGCATCTTCAGCTGTGAAAAGTGTGTTCTCTGAAAAGGCAGTTGGAACTATTGTGGGCAGTTTAGGAGCTGAGTGGGTAGAGGAGAGAATTTCTGCTGTGGAGATCTTATTGAGATGCATGGAAGAAGACGGGACTTGCCGGAACACCATTGCTGAAAAAGCTGAGCTGTCTCCTATTTTGGAAAGCTTCATCAGTGCAACTGATGGAGAGCGTTTTAAGATTGTTCAATTTCTTTCTGAGTTAGTCAAGTTAAATAGAAGAACATTCAATGAACAAATCCTCCATATTATAAAGGAAGAAGGACCTTTTAGTACAATGCATACACTCCTCATTTTCCTGCAGACAGGCCTTCAAGATCAATGTCCAGTCATGGCCGCCGGCCTCTTACTCCAACTTGATCTTCTGGTAGAGCCAAGAAAGATGAGCATATACCGTGAAGAGGCGATAGATACTATTATTTCATGCCTGAGAAAGTCTGAATTCCCTGCTGCCCAGTTGGTAGCTGCTGATACAATCATGTCACTGCAAGGGAGGTTTAGCTTCTCTGGAAGGCCTCTTACCAGAGAAGTCCTTCTTAAACGTGCAGGTATTAGGAAAAATTCTAGAAATCTTGAACAGATGGATCAGATCAGCAACTTATGCCCACAAGTTGAAATAACTCCTGAAGAAGAGATGGCAGCTGATGATTGGGAAAGAAAAATTGCATCTGTTCTAGTCAGCCACGAGTTTGGTATACTTTTTGAGGCTTTAGCAGATGGCACCAAGAGCCGAAATCCAGAACTACGATCAGCATGCTTTATATCAGCTACGTGGCTTGTATACATGCTGACCATTCTACCAGATACAGGGGTACAAGGAGCAGCCCGTGTCTGCTTGCTGAAGCTGTTCATAACAAAACTAAATTCTGCTAAGGACATTGACGACAGAATCCTCTCTATGCTTGCTCTCAATAGCTTTCTCCATTTCCCTGATGGTTTACGTGATCTAACTTCCTACTCTAAGGATATCTTAAAAGGTTTAAGAGAGCTAAAGAGATTTTCTCCCTTGGCATCTGAAATGCTAAAAGTTCTGCTTGAAGAGAATGAATCTAAAGATGAGATCTGGATACATAAAGAGCTCATTCAAGTAGATTGCAGTGAGAATGGAGAAGTGCTGTCTGTCATCTGTTTTAAGGATAAAATTTTTTCAGGGCATTCAGATGGAACTATTAAGGTGTTGACAGTAAGGGATAGCTCATTCCATCTCTTGCAAGAAACCCAAGAACACCTTAAGCCCGTGACAAGCTTGGCACTTTCAGAATCTGGTGACAGGCTATACAGCGGTTCACTTGATCGAACCGTAAAGGTCTGGTCTGTTGGAAAGGCAACAATACATTGCGTACAGGTTCATGATATGAAGGAGCATGTTCATAATTTAGTTGTAACCAATAACATATCTTGTTTCACTCCCCAAGGCGCAGGTGTCAAGGTTCAATCGTGGAATGGGGAATCAAAATTGTTAAATTCTAATAAATATGTGAAGTGCTTGGCTCATATTGATGGTAGATTATACTGTGGATGCCACGATAGCAGTGTTCAGGAGATAGATTTGGCCACTGGAACAGTCAGTACTATTCAAAGTGGTACGAAAAGATTACTTGGGAAAGCAAATCCAATTCATGCACTGCAACTACATGGTGGATTTATATATGCAGCTACCTCTTCCTTGGATGGATCTGCTATAAAGATATGGAACAATTCTAATCACAGCGTGGTTGGATCTCTGCAAACTGGATTGGAAGTGCGGGCTATGGCGGTGAGCTCAGAATTAATGTATTTGGGGGGAAAGGGAGGAGCTGTGGAAGTTTGGGATAAGAAGAGGCAAAATAGAGTTGACACATTACAAACGGGTGCAAATTCTAGGGTTCTTTGCATGACCCTAGACAGCAATGAAGAAACTTTGGTGATTGGAACTTCCAATGGCCAAATTCAGGAAGACAAAGATGAACCTATACCTTAA 3993 0.4543 MATATATTTSSHILRHTTAFTSVVLSQSELRRHLVATLLRECPISDQATLKHLKLAAETVENAITFSSAAVRASSVRLAEKLLLPLPELPLSSFLHSLVLALSNRTVDSAIRLIRIFNSTPSLARSEVAPNLYEHLFSLHLLPVFRWFDEKRTQVLSNSSGDDASEYDYSVTEESVVLPCAKLLSRMSGDQASKLRELEREYEEALDENCRVVAAYFEEVLVSESGSASITPPLLMLKSAEEGDGRKNKEEIEETEMPVFENGRYNPMWSERETSIEFMSNTCSSKSSPTPCYPQRVSPKILKRQKSSKTWTAAVHLKPTIETESSSSDSEAEIEEKDKNVALLEKPRQSQTQEQVQTMFKESRGSPDSPMAECDNPPHGSGKHTPPKDFVCPITSNIFDDPVTLETGQTYERKAIEEWFKTGNSTCPITRQKLQNTQLPKTNYVLKRLIASWKEQNPNSVPLPCESPYEDTEAVPNSTKISTSPKDFVTQATVDGMISELRNAINNLYMSEILEESEMAVLHVEKMWRGVKLGVDIHSMLSKPPIINGFMEILFNSVQPQVLQAAVFLLAEMGSKDHAVIQTLTRVDTDVECVMALFNKGLIEAVVLLYLLKPSTASLAEIVTPESLIAVFNEKEDDLVKMCLKPKTAALLLLAQIIGGGEERLASSAVKSVFSEKAVGTIVGSLGAEWVEERISAVEILLRCMEEDGTCRNTIAEKAELSPILESFISATDGERFKIVQFLSELVKLNRRTFNEQILHIIKEEGPFSTMHTLLIFLQTGLQDQCPVMAAGLLLQLDLLVEPRKMSIYREEAIDTIISCLRKSEFPAAQLVAADTIMSLQGRFSFSGRPLTREVLLKRAGIRKNSRNLEQMDQISNLCPQVEITPEEEMAADDWERKIASVLVSHEFGILFEALADGTKSRNPELRSACFISATWLVYMLTILPDTGVQGAARVCLLKLFITKLNSAKDIDDRILSMLALNSFLHFPDGLRDLTSYSKDILKGLRELKRFSPLASEMLKVLLEENESKDEIWIHKELIQVDCSENGEVLSVICFKDKIFSGHSDGTIKVLTVRDSSFHLLQETQEHLKPVTSLALSESGDRLYSGSLDRTVKVWSVGKATIHCVQVHDMKEHVHNLVVTNNISCFTPQGAGVKVQSWNGESKLLNSNKYVKCLAHIDGRLYCGCHDSSVQEIDLATGTVSTIQSGTKRLLGKANPIHALQLHGGFIYAATSSLDGSAIKIWNNSNHSVVGSLQTGLEVRAMAVSSELMYLGGKGGAVEVWDKKRQNRVDTLQTGANSRVLCMTLDSNEETLVIGTSNGQIQEDKDEPIP* 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3276 1330 MobiDBLite consensus disorder prediction 321 386 - -
Aev03g3276 1330 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1084 1117 - -
Aev03g3276 1330 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 1322 - -
Aev03g3276 1330 Gene3D - 1151 1323 IPR015943 GO:0005515
Aev03g3276 1330 ProSiteProfiles Trp-Asp (WD) repeats profile. 1084 1117 IPR001680 GO:0005515
Aev03g3276 1330 MobiDBLite consensus disorder prediction 330 344 - -
Aev03g3276 1330 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 1322 - -
Aev03g3276 1330 SUPERFAMILY RING/U-box 383 460 - -
Aev03g3276 1330 ProSiteProfiles U-box domain profile. 385 460 IPR003613 GO:0004842|GO:0016567
Aev03g3276 1330 SUPERFAMILY WD40 repeat-like 1047 1321 IPR036322 GO:0005515
Aev03g3276 1330 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 377 462 IPR013083 -
Aev03g3276 1330 SUPERFAMILY ARM repeat 29 1033 IPR016024 -
Aev03g3276 1330 CDD RING-Ubox_PUB 390 432 IPR045210 -
Aev03g3276 1330 SMART Ubox_2 389 453 IPR003613 GO:0004842|GO:0016567
Aev03g3276 1330 Pfam WD domain, G-beta repeat 1081 1116 IPR001680 GO:0005515
Aev03g3276 1330 Gene3D - 1023 1145 IPR015943 GO:0005515
Aev03g3276 1330 SMART WD40_4 1207 1243 IPR001680 GO:0005515
Aev03g3276 1330 SMART WD40_4 1246 1282 IPR001680 GO:0005515
Aev03g3276 1330 SMART WD40_4 1151 1194 IPR001680 GO:0005515
Aev03g3276 1330 SMART WD40_4 1035 1072 IPR001680 GO:0005515
Aev03g3276 1330 SMART WD40_4 1077 1116 IPR001680 GO:0005515
Aev03g3276 1330 Coils Coil 188 208 - -
Aev03g3276 1330 Gene3D - 534 873 IPR011989 -
Aev03g3276 1330 MobiDBLite consensus disorder prediction 345 364 - -
Aev03g3276 1330 Pfam U-box domain 387 457 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3276 Aev-Chr3 30808820 30814562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3276 374 462 U-box Gene Family AT1G27910 46.067 4.41e-18 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3276 - - gmx:100808867 1868.97