Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3274 ATGTCTGTGCCATCAGAACACGGGTATGTAGGATTGGGAGAGCTTCCTACAATGGAAAGCTCCGAAAAGTTCAACGTTGGTTTGAACCTCAAAGCCACAGAGTTGAGGCTTGGGTTGCCTGGTTCTGAGTCTCCAGAGAGGGAAGCCCCACATGGCATGGTAAAGATTTTGGTATCAGGGGCCAAGAGGGGTTTCTCGGACGCCATTGATGGAGCTTCCGGGAAGTGGGTTTTGTCTGGGAACGGTGGATCTGAATTGGGTTTGGGCAAAGATGGTGGCTTGTTCTCTCCCAGGGGTGTTGCTGTTGCTGACTGCACCAACAAGCAAACACCTTTGGGTGGGTCTCTTGTGAAAGAGAGTTTTCCACAGTCTTCAAAGCCATTGCATGAGAAGAAGCCCCAGATTTCTGCTCCTCCTCCTGCTGCAAAGGCACAAGTTGTTGGATGGCCACCAATCCGGTCTTTCCGGAAGAACTCAATGGCTGCTCAGCCTCAAAAGAGTGAAGCTGAAGCAGAAGTCAAGCATGGATGCCTTTATGTGAAAGTCAGCATGGATGGTGCCCCATACTTGAGGAAAATGGATCTGAACCATTTTAGTTCCTACAGGGAGCTCTCTTCAGCACTTGAAAACATGTTTAGTTGTTTTACACTTGGTCAATGCGGCTCTCATGGGGTTTCTGGTCGAGATAATTTAAGTGAAAGTAGATTGGCCGACCTCCTTCACGGTTCGGAATATGTGCTCACCTATGAAGACAAGGATGGTGATTGGATGCTTGTTGGTGATGTTCCATGGGAGATGTTCACTGACTCTTGCAAGAAGCTGAGGATAATGAAGAGCTCCGAAGCAATTGGGCTAGCACCAAGAGCCATGGAAAAGTGCAAAAGTCGCGACTAG 894 0.4866 MSVPSEHGYVGLGELPTMESSEKFNVGLNLKATELRLGLPGSESPEREAPHGMVKILVSGAKRGFSDAIDGASGKWVLSGNGGSELGLGKDGGLFSPRGVAVADCTNKQTPLGGSLVKESFPQSSKPLHEKKPQISAPPPAAKAQVVGWPPIRSFRKNSMAAQPQKSEAEAEVKHGCLYVKVSMDGAPYLRKMDLNHFSSYRELSSALENMFSCFTLGQCGSHGVSGRDNLSESRLADLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKKLRIMKSSEAIGLAPRAMEKCKSRD* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3274 297 ProSiteProfiles PB1 domain profile. 177 279 IPR000270 GO:0005515
Aev03g3274 297 Gene3D - 171 291 - -
Aev03g3274 297 SUPERFAMILY CAD & PB1 domains 173 278 - -
Aev03g3274 297 Pfam AUX/IAA family 33 288 IPR033389 -
Aev03g3274 297 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 18 290 IPR003311 GO:0005634|GO:0006355
Aev03g3274 297 MobiDBLite consensus disorder prediction 113 130 - -
Aev03g3274 297 MobiDBLite consensus disorder prediction 113 145 - -
Aev03g3274 297 PANTHER AUXIN-INDUCED PROTEIN 18 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3274 Aev-Chr3 30792594 30795185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3274 180 287 B3 DNA Binding Superfamily AT4G23980 28.704 6.80e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aev03g3274 AUX_IAA 7.8e-86 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3274 K14484 - gmx:100803754 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3274 03 30792594 30795185 Aev03g3274 03 30792594 30795185 ECH
Aev03g3274 03 30792594 30795185 Aev05g3345 05 33090297 33092914 PCT