Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3257 ATGGGAGAGCAATCAAGCTCCGACACAGCCACAAGTCCAAACTGCTCACCATCACCATCATCATCAACATCATCATCATCGCCACGTGTCCCAACATCCACTCCCACTCTAAAAGATTCCTTCTCGGAGCCCCATGTACCCGACCCGGATCAGAAACGGGGCAAGCGGGTCAGGGACGACAACAACAACAACAATAGCAAGCACCCGGTTTACAGAGGGGTGCGAATGAGGGCGTGGGGCAAGTGGGTATCCGAAATCCGCGAGCCACGCAAGAAGAACCGCATCTGGCTCGGCACCTTCGCCACCCCTGAGATGGCCGCGCGTGCACACGACGTCGCCGCCCTCGCCATCAAAGGCACCTCCGCCATCCTCAACTTCCCCGAACTCGCCGGTTCCCTCCCCCGACCCGTGTCCAACTCCCCCCGCGACGTTCAGTCCGCCGCCGCCAAAGCCGCTGCCATGGACGTTTTCAGTCCCAAAACGGCGTCGCATTCATCCTCATCGTCGTCGTCGTCATCCTGTTCGCTGTCGCAGTGTTCGTCTTCATCGTCGCTGGCGATCTCGTCATCAGGAGACCCATCGACGGCGGAGGAGCTTGGGGAGATAGTGGAGTTGCCAGCTCTGGGAACGAGTATCGAATCGAACAAGGAGTTGGTGTTTCTGGACCCAGTGGACGGGTGGCTGTATCCACACCCTTGGCATCACAGCATTTATGAGGACGATAGGGACTGTGCTGCCTATTTTATTGAGGAAGATCAGATTTCAATGCACCACCCTGCTCCTACTCCTGCTCCTGAGGGTATCATTCTTTGTGGTTTTGATGCTCCTCTCTGGCAACACTAA 843 0.5694 MGEQSSSDTATSPNCSPSPSSSTSSSSPRVPTSTPTLKDSFSEPHVPDPDQKRGKRVRDDNNNNNSKHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFATPEMAARAHDVAALAIKGTSAILNFPELAGSLPRPVSNSPRDVQSAAAKAAAMDVFSPKTASHSSSSSSSSSCSLSQCSSSSSLAISSSGDPSTAEELGEIVELPALGTSIESNKELVFLDPVDGWLYPHPWHHSIYEDDRDCAAYFIEEDQISMHHPAPTPAPEGIILCGFDAPLWQH* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3257 280 MobiDBLite consensus disorder prediction 1 40 - -
Aev03g3257 280 MobiDBLite consensus disorder prediction 1 72 - -
Aev03g3257 280 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 15 252 - -
Aev03g3257 280 ProSiteProfiles AP2/ERF domain profile. 70 127 IPR001471 GO:0003700|GO:0006355
Aev03g3257 280 SUPERFAMILY DNA-binding domain 70 128 IPR016177 GO:0003677
Aev03g3257 280 Pfam AP2 domain 69 119 IPR001471 GO:0003700|GO:0006355
Aev03g3257 280 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Aev03g3257 280 PRINTS Ethylene responsive element binding protein signature 93 109 IPR001471 GO:0003700|GO:0006355
Aev03g3257 280 CDD AP2 71 129 IPR001471 GO:0003700|GO:0006355
Aev03g3257 280 MobiDBLite consensus disorder prediction 43 65 - -
Aev03g3257 280 Gene3D AP2/ERF domain 70 128 IPR036955 GO:0003700|GO:0006355
Aev03g3257 280 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 252 - -
Aev03g3257 280 SMART rav1_2 70 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3257 Aev-Chr3 30715925 30716767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3257 39 236 AP2-EREBP Transcription Factor Family AT5G11590 59.606 1.53e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev03g3257 AP2 7.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3257 K09286 - gmx:100778201 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3257 03 30715925 30716767 Aev05g3329 05 32965129 32965863 PCT