Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3232 ATGGACAACTGCTGCCTCCTCACCTTTCTCCTCCTCCTCCTCCATTTGCGCCCAGCATCACCCGCCATTGCCGTCGGTGTCGGCATTGGCGGCACTGTTGGCGTTGGCGTAGGTGTAGGTGTAGGCGTCGGCATTGGCAACGGCAACGGCAACGGTGGTGGTGGGGCTAACACCCCTGCATCACCCTCTTCATCGCCAAATTTGGAGGGTGCTTACAAAGCTCTCCAAGCATGGAAATCAGCAATCAGCGATGATCCTTTGAAGATTCTAGATTCCTGGGTCGGTCCCAACGTCTGCTCCTATCAAGGAATCTTCTGTGCCACCACAGCTGCTGGTTCTGTCGTTGCAGGGGTAGATCTCAACCATGCAAATCTGCAAGGAACTCTAGTCAAAGAACTGTCTCTGCTCGTTGACATGTCTCTCCTTCACCTCAACAGTAACAGGTTCACCGGCACAGTCCCTGACACATTCAAAGACCTCACCTCTCTTGAGGAGCTCGACCTCAGCAACAACCACCTCTCTGGCCCTTTCCCCACAGTCGCTCTCTACATCCCAAGCCTCATCTACTTGGACCTCAGGTTCAACTCCTTCTCAGGGCAAATCCCTGATGAGGTTTTCAGCAGGAGACTCGATGCAATATTCCTCAACAACAACCAGTTTGAAGGTGAGATCCCGCAGAACCTGGGAAGCTCCCCTGCATCAGTCATAAACTTGGCTAACAACAAGCTCAGTGGGAACATCCCAGCAAGTCTTGGCTTGGTTGGGGGCTCTAAGCTGAAGGAGGTTCTGTTTCTCAATAACCAGCTGACGGGTTGCATCCCTGAAGGAGTGGGGCTATTCACAGAGATGCAAGTTCTTGATGTGAGCTTCAACTCGCTGATGGGTCATTTGCCGGACACGATATCTTGCTTGGAAGGCATTGAGGTCCTCAATTTGGCGCATAACAAGCTCTCCGGGGAGTTATCTGATGTGATATGCTCTTTGAGGAGCCTAGTGAATCTAACTGTTGCTTACAACTTCTTCTCTGGGTTCAGCCAGGAATGCACAAGGCTCTTCAATGTGGGATTTGATTTATCAGATAACTGCATTCCAGGAATGAATATGCAGAGGCCTCAACCAGAGTGCTCTGTCATCCCTGGTGGTAGCCTCAACTGTCTAAGAATCCCTACTCCGAAGCCTCTTGTTTGTGCTTCACTGCCTTCAATACTCTCTAAGAACACACATCACAGTTCATCATCATCATCTCCCTGA 1251 0.5076 MDNCCLLTFLLLLLHLRPASPAIAVGVGIGGTVGVGVGVGVGVGIGNGNGNGGGGANTPASPSSSPNLEGAYKALQAWKSAISDDPLKILDSWVGPNVCSYQGIFCATTAAGSVVAGVDLNHANLQGTLVKELSLLVDMSLLHLNSNRFTGTVPDTFKDLTSLEELDLSNNHLSGPFPTVALYIPSLIYLDLRFNSFSGQIPDEVFSRRLDAIFLNNNQFEGEIPQNLGSSPASVINLANNKLSGNIPASLGLVGGSKLKEVLFLNNQLTGCIPEGVGLFTEMQVLDVSFNSLMGHLPDTISCLEGIEVLNLAHNKLSGELSDVICSLRSLVNLTVAYNFFSGFSQECTRLFNVGFDLSDNCIPGMNMQRPQPECSVIPGGSLNCLRIPTPKPLVCASLPSILSKNTHHSSSSSSP* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3232 416 SUPERFAMILY L domain-like 71 352 - -
Aev03g3232 416 Gene3D Ribonuclease Inhibitor 71 233 IPR032675 -
Aev03g3232 416 PRINTS Leucine-rich repeat signature 304 317 - -
Aev03g3232 416 PRINTS Leucine-rich repeat signature 163 176 - -
Aev03g3232 416 Pfam Leucine rich repeat N-terminal domain 72 106 IPR013210 -
Aev03g3232 416 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 416 - -
Aev03g3232 416 PANTHER LRR/EXTENSIN 1 416 - -
Aev03g3232 416 Gene3D Ribonuclease Inhibitor 235 388 IPR032675 -
Aev03g3232 416 Pfam Leucine rich repeat 142 196 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3232 Aev-Chr3 30547482 30548732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3232 52 387 Leucine-rich Repeat extension Gene Families AT3G24480 48.851 9.82e-106 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3232 - - gsj:114407518 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3232 03 30547482 30548732 Aev03g3232 03 30547482 30548732 ECH