Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3230 ATGAATAATAAGAATAAGATGATGAGGTGTGTTAGCAGCTCGGATCTGATAGATGCAAAGCTGGAAGAGCATCAGCTCTGTGGATCCAAACAGTGCCCTGGTTGTGGACACACGTTTCAACCCACCACCAACCCGGAGTGGGTAGGTCTACCAGCAGGAGTGAAGTTTGATCCAACGGACCAAGAACTGATACAACACCTTGAGGCCAAAGTAGAGTCAAAGACCATCAACAACAATAATAAGTCACACCCTTTGATAGACGAGTTCATCCCAACTATTGAAGGAGACGATGGAATTTGTTACACCCATCCTGACAAACTTCCAGGAGTGAGAAGAGATGGGTTGAGCAGACACTTCTTCCACAGGCCGTCAAAGGCTTACACGACGGGGACACGAAAGAGGAGAAAGATTCAAAACGATGAGTGCGAGTTGCAAGGCGAAACGCGGTGGCACAAGACCGGTAAGACGAGGCCAGTCATGGTGGGCGGCAAGCAGAGAGGGTGCAAGAAGATTCTGGTGCTCTACACCAACTTCGGCAAGAACAGAAAGCCGGAGAAGACCAACTGGGTGATGCACCAGTACCATGTGGGCCTCCACGAAGAAGAGAAGGAAGGGGAGCTTGTGGTCTCTAAGATCTTTTATCAAACACAACCAAGGCAGTGCAGCAATTATTGGCCTTCTTCTTTAGAAAATACAACAACTGCTGCTGCGCCTCAAGAATTAATAAATAACAATAACGGAATAAGCAGTACAAGAAACAACAACAGTAATAGTAATAGTAATGATGCAATAAGCTCTTCTTCTTCAAAAGAAATGCTAGTTACTGTTACTCAGAGTCAGAGAGACGACAGCAGAGATGAAATGTGTAGCTTCACCACCGCCAGCTTATCAGACCATTTCGGATTCATTCCATTCAGAAAGCCCGCCTTTCATGATCAGGTTGGAGTAGGAGAAGGTTCGACAGCAAGAGAAGAAGTTGAAGCATCAGCAGCAGCAGCAGCGGGGGGGTCATGCGAGCAGCAAGTACATCATCATCATCACCAACACAATGCAACGACAGCGTTTCATATGAGTAGGCCTTCACATCCCATAATATCTCCGCCTCCACTCCACCACACTACTTCCATCATCCTAGACGACCACAACGACTCATCCTCTTACCATCTCCCCACAATTATGCTCCAAAATCATCATCATTTCCAGCAACAGCATCATCGTAAACTAGGAGGAGGAAGGTCTGCGTCTGGCTTGGAAGAAATCATTATGGGGTGCACTTCTACTCATGATCATATCAAAGAGGCATCATCGTCAATGACAAACGCAGAAGAAGGTGAATGGTTGAAGTACTCTTCTTACTGGCCTGACCCGGCCCATCATGGGTAG 1383 0.4678 MNNKNKMMRCVSSSDLIDAKLEEHQLCGSKQCPGCGHTFQPTTNPEWVGLPAGVKFDPTDQELIQHLEAKVESKTINNNNKSHPLIDEFIPTIEGDDGICYTHPDKLPGVRRDGLSRHFFHRPSKAYTTGTRKRRKIQNDECELQGETRWHKTGKTRPVMVGGKQRGCKKILVLYTNFGKNRKPEKTNWVMHQYHVGLHEEEKEGELVVSKIFYQTQPRQCSNYWPSSLENTTTAAAPQELINNNNGISSTRNNNSNSNSNDAISSSSSKEMLVTVTQSQRDDSRDEMCSFTTASLSDHFGFIPFRKPAFHDQVGVGEGSTAREEVEASAAAAAGGSCEQQVHHHHHQHNATTAFHMSRPSHPIISPPPLHHTTSIILDDHNDSSSYHLPTIMLQNHHHFQQQHHRKLGGGRSASGLEEIIMGCTSTHDHIKEASSSMTNAEEGEWLKYSSYWPDPAHHG* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3230 460 MobiDBLite consensus disorder prediction 243 286 - -
Aev03g3230 460 ProSiteProfiles NAC domain profile. 50 215 IPR003441 GO:0003677|GO:0006355
Aev03g3230 460 SUPERFAMILY NAC domain 44 215 IPR036093 GO:0003677|GO:0006355
Aev03g3230 460 Gene3D NAC domain 59 219 IPR036093 GO:0003677|GO:0006355
Aev03g3230 460 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 4 438 - -
Aev03g3230 460 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 438 IPR044799 GO:0003700
Aev03g3230 460 MobiDBLite consensus disorder prediction 243 279 - -
Aev03g3230 460 Pfam No apical meristem (NAM) protein 51 196 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3230 Aev-Chr3 30532301 30536118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3230 12 453 NAC Transcription Factor Family AT5G56620 49.134 2.60e-126 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev03g3230 NAM 7.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3230 - - mtr:MTR_8g102240 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3230 03 30532301 30536118 Aev03g3230 03 30532301 30536118 ECH