Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3207 ATGGGGAGAAAGTGCTCGCATTGTGGGAAGATAGGCCATAATTGCAGGACCTGCAGCATCACTACTACTTCTTTCAGAGGACTTCGCCTGTTTGGCGTCCAACTTGCTGCTGCTGCTGCTGCTGAGGAGGACTGTTCATCATCTTCTAATTGTCTTCCTCCTCGTCCTCATCCTCATATTATTATGAAGAAAAGCCTTAGCATGGACTCCTTCATTACTATTCCCTCCTCTTCCGCTTCTTCACCGCCCTCTTCTTCAACATTATTAATCTCCAATACTAATAATTACTCATCGTCATCATCATCTATTGGGTATCTATCAGATAATAATGCTCCACCTCATCCTCCTCCTCATCCTCATCCTCATCCTCATCCTCATCATCATCAACATCAAGAGAGGAAGAAAGGAGTGGCATGGACAGAAGAGGAGCACAGGAGATTCCTAGAGGGGCTTGAGAAGCTGGGAAAGGGGGATTGGCGGGGCATCTCTAACAACTTTGTCACCACAAGAACGCCTACTCAAGTCGCCAGCCATGCTCAGAAGTTCTTTCTTCGCCTCGCTACCACCACCACCAACAACAAGCGACGCTCAAGTGTCTTTGACATGGTTGGTAATGGTAGCAGCAGCAACAGCAACAGCAACAGCAACAACAACAACATGATGAAGAAGAAGAATGCTGCTATGATGATCACAGGTTGTTGCAATAACAATAATAAGTCATCAGGAGTAGTAGTTTGCAGTACTAGTAATAATAGTAAATGTGAAGAATTATTATTAGTCCTTGACAATGAGAATGAGAATGAGAATGAGAATGAGAATTATATTGTGAATGTGAATGATGGGGCCATCATCACTACTACTTGTTCTAATGGAGGAGGAGGAGGAGTAGTTCATCATCATCATTCATCAGATGGTGATGATGATCTGGAGCTCACTCTCGCTACTCTACCACTACCACCCCCTAATTAA 969 0.4407 MGRKCSHCGKIGHNCRTCSITTTSFRGLRLFGVQLAAAAAAEEDCSSSSNCLPPRPHPHIIMKKSLSMDSFITIPSSSASSPPSSSTLLISNTNNYSSSSSSIGYLSDNNAPPHPPPHPHPHPHPHHHQHQERKKGVAWTEEEHRRFLEGLEKLGKGDWRGISNNFVTTRTPTQVASHAQKFFLRLATTTTNNKRRSSVFDMVGNGSSSNSNSNSNNNNMMKKKNAAMMITGCCNNNNKSSGVVVCSTSNNSKCEELLLVLDNENENENENENYIVNVNDGAIITTTCSNGGGGGVVHHHHSSDGDDDLELTLATLPLPPPN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3207 322 MobiDBLite consensus disorder prediction 100 138 - -
Aev03g3207 322 Pfam Myb-like DNA-binding domain 138 181 IPR001005 -
Aev03g3207 322 ProSiteProfiles Myb-like domain profile. 131 183 IPR001005 -
Aev03g3207 322 SMART sant 135 185 IPR001005 -
Aev03g3207 322 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 134 185 IPR006447 GO:0003677
Aev03g3207 322 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 315 - -
Aev03g3207 322 CDD SANT 138 183 IPR001005 -
Aev03g3207 322 Gene3D - 137 188 - -
Aev03g3207 322 MobiDBLite consensus disorder prediction 119 133 - -
Aev03g3207 322 PANTHER TRANSCRIPTION FACTOR KUA1 1 315 - -
Aev03g3207 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 187 IPR017930 -
Aev03g3207 322 MobiDBLite consensus disorder prediction 198 220 - -
Aev03g3207 322 ProSiteProfiles SANT domain profile. 139 187 IPR017884 -
Aev03g3207 322 SUPERFAMILY Homeodomain-like 132 186 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3207 Aev-Chr3 30358150 30359349 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev03g3207 Myb_DNA-binding 1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3207 - - cit:102624682 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3207 03 30358150 30359349 Aev03g3207 03 30358150 30359349 ECH