Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3196 ATGGGTGTTTCACTTGTACCGCTCCATCATCCTCCCACTTGTTTTCTCCCATCTTCATCAACTCTTTCGCATCCTGATTTCGCTTTTTTTACGCTCCCTGCCCTCCGCCGCCACCGCCACCGCCACCGCCCTTCCCTCGCCGTCAGAGCCACTGCCGACAGAAGTCCTCAGCCTCTGCTTCAGGTGAATGATCTTAGGGCTAAGATCATCGAAAACGGCGTGGAGATTCTCCACGGTGTTAACCTTACAGTCAACGAGGGAGAGGTTCACGCCATCATGGGCAAGAACGGTTCTGGAAAGAGCACTTTCGCCAAGGTTCTTGTTGGGCATCCCGATTATGAGGTTACAGGAGGTAGTGTTGTGTTCAAAGGGGAAGATTTGCTTGAAATGGAACCCGAGGAACGGTCCCTTGCTGGTCTCTTTATGAGCTTCCAGTCCCCTGTTGAGATTCCAGGTGTTTCCAATGATGAGTTTTTGGTTATGGCATACAATGCTCGGAGAAGAAAGCTTGGCCTCCCTGAGCTCGGTCCACTCGAGTGCTTTTCTTACCTGATGGAGAAACTCCAACTTGTTAACATGAAGCCAGACTTTCTCAATAGGAATGTCAATGAAGGATTTAGTGGTGGTGAACGCAAACGCAATGAGATTTTGCAGCTTGCGGTCTTGGGGGCAGACTTGGCCATTCTGGATGAAATTGATTCGGGATTGGATGTTGATGCACTCAGAGATGTGGCTAGTGCAGTCAATAGAATACTAACCCCGAAGAATTCTCTGCTGATGATAACTCATTATCGACGGATTCTGGATCTTTTAAATCCAACACATGTCCATGTTATGGACAAGGGGAAGATTGCAAGGACAGGTGATATATCTATGGTAGAAACTATTGAGGCTGAGGGATATGAAACAGTCTCTGCTTTATCTTAA 927 0.4779 MGVSLVPLHHPPTCFLPSSSTLSHPDFAFFTLPALRRHRHRHRPSLAVRATADRSPQPLLQVNDLRAKIIENGVEILHGVNLTVNEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSVVFKGEDLLEMEPEERSLAGLFMSFQSPVEIPGVSNDEFLVMAYNARRRKLGLPELGPLECFSYLMEKLQLVNMKPDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVASAVNRILTPKNSLLMITHYRRILDLLNPTHVHVMDKGKIARTGDISMVETIEAEGYETVSALS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3196 308 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 50 305 IPR010230 GO:0005524
Aev03g3196 308 Pfam ABC transporter 77 231 IPR003439 GO:0005524
Aev03g3196 308 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 306 IPR003439 GO:0005524
Aev03g3196 308 Gene3D - 59 307 IPR027417 -
Aev03g3196 308 SMART AAA_5 86 283 IPR003593 -
Aev03g3196 308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 291 IPR027417 -
Aev03g3196 308 ProSitePatterns ABC transporters family signature. 206 220 IPR017871 GO:0005524
Aev03g3196 308 CDD ABC_FeS_Assembly 60 301 IPR010230 GO:0005524
Aev03g3196 308 TIGRFAM sufC: FeS assembly ATPase SufC 60 303 IPR010230 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3196 Aev-Chr3 30291421 30293179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3196 74 288 Calmodulin-binding Proteins AT2G36910 25.778 6.35e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3196 K09013 - gmx:100811883 446.817