Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3180 ATGGAAGGGGATGAGGATCAATTCTATGATACCCGTGAGGAATTGTGTTCTGTCTCTGATGGGAGTTCATGTATGTCAGAATCAGATGAATCTAGTTCTTGTAATGAACATTTTACTAGGTATAAGGATTGGACAAAAACCAACCTTGAAAGCGTTCATATGAGACGCCTCAATTTCCTAAGATGGATGGGTTTAGACCCTGATTCTGATGTGAATTTAATGATGGCTAAGGATGAGTTGGCTGATCCATCTTGTGGAGTTGACCGAGTCACAGCCACCAGTGATGCAGTTTTGAGAACATCGGGTGTTGTAGAGGGTCCTCTTCCCTCAACCTCAAACCAGATTGTATTGGATTCTTTGTCAAATGAGTCTTCTAGCTCGGTAGAAAATCGCGGTGCTACTGATAATTTAACATGTATGATAAAGAATTTGGATGATGGGACACAATACATTGTGGATGAATTGGGTCAAGATGGAACACTTAGTACACTGCGAGTTATGGGGTCTAACCAATTGATTAGCATGGAAGAGTTTCAGAGAAATACTGGGCCATCACCTCTGGTTCAGAGATATTTACAGAGGGAGGCTGAGAACACAAGATTGCTGGGTGTTACAAAGAAGAAATTGAAGAGGGGTTGGCTAAGGAAGCTTGGTTCTGTGGCTTGTGTAGTTCATGGTCACGGGCTTAATGAAATGAATAACAAGGACATTGATTCAGTAGGTGGATCTGGGATTCAAAGAGTTCGAGTTCATTCACATGGGAAGCGATTTAAGGAGCTTTCTTCCGTTTACACTGAGCAGGAGTTTAAAGCACATAAGGGTGTTATTTTGACAATGAAGTTCAGTCTTGATGGAAAATATCTGGCTAGTGGTGGTGAAGATGGCATTGTACGTGTATGGAAGGTGCTCGAGGATGAAAGATCAAGTGAATTGGACGTTCTAGACAATGATCCCTCAAGCATATATTTCAAAATGAACAACTTTTCATGTGTAGCTCCACTTGATGTACAAAAAGAAAAATTGGTTAAGACAGAGAAGCTGAGGAAATCATCTGATTTGACATGTGTGGTTATCCCACCAAAAACCTTCCGTATATCGGGGAAACCATTGCATGAATTCCAGGGGCACCATGGCGACATTTTAGACCTTGCATGGTCCAAAAGAGGGTTACTTCTGTCATCCTCTGTTGATAAGACAGTGCGCCTATGGCAGGTTGGAACCAACAGATGCCTTAGCATTTTTTCCCACAATAATTATGTGACATGTGTCCATTTCAATCCCATAAATGATAATATTTTCATAAGTGGTTCAATTGATGGAAAAGTGCGCATATGGGAAGTTCTTTGTTGCCGGGTTATCGATTACATTGATATCAGAGAGATAGTCACTGCTGTGTGCTTCCGCCCTGATGGAAAGGGAACAATTGTGGGCACCATGGCAGGCAATTGCCGTTTCTATGATATAATAGATGATCATATGCAATTAGACACTCGATTAAGCTTACGAGGCAAAAAGAAGATGACAGTGGGAAAAAGGATCACTGGCTTTCAGTTCTCACCAATTGACACAAGCCAATTGTTGGTTGCTTCTGCCGATTCCCATGTCTGTATACTTTCTGGAGTTGATGTCATCTACAAATTCAAGGGCTTAAGAAGTGCAGGTCAGATGCATGCTTCATTCACATCCGACGGGAAACACATTGTTTCGGTTAGCGAGGATTCAAATGTATGTGTCTGGAATTACACTGGCCAGGATAGAAATGCTTCCAAATCGAAGAAGATTTGGTCGTCCGAGTGTTTCCTGTCCCACAATGCAGCAGTCGCCATACCATGGTGTGGCATGGAACCAATTCCTGGAACACTCTTGTCCCCGTCACTGAGGGATGATTTCAATCACAGGCCGTTCCTGTCTTCGCCGGATTGCTTCTTCCTGAGCCGCGGGTTTCTGTCGGAGTTAGTCCCAAAGGTCTCTCCGACGTGGCCGGAGGAGACGCTCGAGGACTCGTGCCAAACCGTGGTGTCCCCTAAAATGTGCAAATCGGAGTACAAGTTCTTGAGAAGTGCTTGCAAGGGAATGTCTAATTCTCACATGTGGGGCCAAGTAATTGTAACTGCAGGATGGGATGGTCACATAAGAGTGTACCAGAATTATGGACTACCAATTCGGGTTTGA 2172 0.4342 MEGDEDQFYDTREELCSVSDGSSCMSESDESSSCNEHFTRYKDWTKTNLESVHMRRLNFLRWMGLDPDSDVNLMMAKDELADPSCGVDRVTATSDAVLRTSGVVEGPLPSTSNQIVLDSLSNESSSSVENRGATDNLTCMIKNLDDGTQYIVDELGQDGTLSTLRVMGSNQLISMEEFQRNTGPSPLVQRYLQREAENTRLLGVTKKKLKRGWLRKLGSVACVVHGHGLNEMNNKDIDSVGGSGIQRVRVHSHGKRFKELSSVYTEQEFKAHKGVILTMKFSLDGKYLASGGEDGIVRVWKVLEDERSSELDVLDNDPSSIYFKMNNFSCVAPLDVQKEKLVKTEKLRKSSDLTCVVIPPKTFRISGKPLHEFQGHHGDILDLAWSKRGLLLSSSVDKTVRLWQVGTNRCLSIFSHNNYVTCVHFNPINDNIFISGSIDGKVRIWEVLCCRVIDYIDIREIVTAVCFRPDGKGTIVGTMAGNCRFYDIIDDHMQLDTRLSLRGKKKMTVGKRITGFQFSPIDTSQLLVASADSHVCILSGVDVIYKFKGLRSAGQMHASFTSDGKHIVSVSEDSNVCVWNYTGQDRNASKSKKIWSSECFLSHNAAVAIPWCGMEPIPGTLLSPSLRDDFNHRPFLSSPDCFFLSRGFLSELVPKVSPTWPEETLEDSCQTVVSPKMCKSEYKFLRSACKGMSNSHMWGQVIVTAGWDGHIRVYQNYGLPIRV* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3180 723 ProSiteProfiles Trp-Asp (WD) repeats profile. 269 310 IPR001680 GO:0005515
Aev03g3180 723 Gene3D - 258 506 IPR015943 GO:0005515
Aev03g3180 723 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 373 405 - -
Aev03g3180 723 Gene3D - 507 716 IPR015943 GO:0005515
Aev03g3180 723 SUPERFAMILY WD40 repeat-like 264 714 IPR036322 GO:0005515
Aev03g3180 723 ProSiteProfiles Trp-Asp (WD) repeats profile. 413 447 IPR001680 GO:0005515
Aev03g3180 723 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 413 447 - -
Aev03g3180 723 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 3 723 - -
Aev03g3180 723 PANTHER WD REPEAT DOMAIN 44 3 723 IPR040324 -
Aev03g3180 723 PRINTS G protein beta WD-40 repeat signature 288 302 IPR020472 -
Aev03g3180 723 PRINTS G protein beta WD-40 repeat signature 391 405 IPR020472 -
Aev03g3180 723 PRINTS G protein beta WD-40 repeat signature 433 447 IPR020472 -
Aev03g3180 723 ProSiteProfiles Trp-Asp (WD) repeats profile. 373 413 IPR001680 GO:0005515
Aev03g3180 723 SMART WD40_4 407 446 IPR001680 GO:0005515
Aev03g3180 723 SMART WD40_4 366 404 IPR001680 GO:0005515
Aev03g3180 723 SMART WD40_4 448 487 IPR001680 GO:0005515
Aev03g3180 723 SMART WD40_4 262 301 IPR001680 GO:0005515
Aev03g3180 723 SMART WD40_4 540 580 IPR001680 GO:0005515
Aev03g3180 723 SMART WD40_4 675 715 IPR001680 GO:0005515
Aev03g3180 723 SMART WD40_4 494 539 IPR001680 GO:0005515
Aev03g3180 723 Pfam WD domain, G-beta repeat 367 403 IPR001680 GO:0005515
Aev03g3180 723 Pfam WD domain, G-beta repeat 409 445 IPR001680 GO:0005515
Aev03g3180 723 Pfam WD domain, G-beta repeat 267 301 IPR001680 GO:0005515
Aev03g3180 723 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 269 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3180 Aev-Chr3 30189442 30192713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3180 263 477 Miscellaneous Gene Families AT5G08390 24.066 3.68e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3180 - - ahf:112790741 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3180 03 30189442 30192713 Aev03g3180 03 30189442 30192713 ECH
Aev03g3180 03 30189442 30192713 Aev08g0776 08 4493344 4495990 ECH