Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3168 ATGTTGAAGAAGAGGGGGCTGAGTGTGGTGATGGGTGTTCCACAGACAACTCCAACCCCACCATCCCCACATCTCTATCCTCAGGAGCTTCAGCTCAAGCTCTACCAGGCCTTCATATTCTCAATTCCAATACTCTTTTCCATCATCTTGGTTCTGCTCTTTTACTTGTTCTATCTCAAGAGGAGGGCTTCATCTCTCTCCTCTCCTCCTCTCCACATACTTCCAACCACTGCCAATCCCCAAACTGCATACCCTTATCCTTCCTCACCATATGGCTTGGATCTGACGGTCCAATTTGTGGACAAACTTCCAAGAATCTTATTTGATGAGAATTTGAGAGCAAGGGATTCAGTGTGTTGCGTGTGTCTGGGAGAATTTGAGGTGAAAGAGGAGGTTTTGCAGATCCCATACTGCAAGCATGTGTTTCACACAGAATGCATACATAACTGGCTTCAATCCAACTCCACATGCCCACTATGCAGATGCTCCATCATACCCACTTCTTCTTCTACAAAGTTGCTTCCCAATCCTATTGCCTCATCACACTCAGACCCACCACCATTAACTAATTCAGGATCATCTCCATCACACAATTCACACTCACACTCACACATTATTGTGTCATTGCCTACTCCTCCTCCTCAACTACCTCATCACGATGATGAACCCGGTAGTGCTTCCTCAAGAGAATGA 693 0.4589 MLKKRGLSVVMGVPQTTPTPPSPHLYPQELQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASSLSSPPLHILPTTANPQTAYPYPSSPYGLDLTVQFVDKLPRILFDENLRARDSVCCVCLGEFEVKEEVLQIPYCKHVFHTECIHNWLQSNSTCPLCRCSIIPTSSSTKLLPNPIASSHSDPPPLTNSGSSPSHNSHSHSHIIVSLPTPPPQLPHHDDEPGSASSRE* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3168 230 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 17 176 - -
Aev03g3168 230 Pfam Ring finger domain 119 161 IPR001841 -
Aev03g3168 230 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHA4A-RELATED 17 176 - -
Aev03g3168 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 166 IPR013083 -
Aev03g3168 230 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Aev03g3168 230 SMART ring_2 119 160 IPR001841 -
Aev03g3168 230 MobiDBLite consensus disorder prediction 174 230 - -
Aev03g3168 230 MobiDBLite consensus disorder prediction 174 208 - -
Aev03g3168 230 SUPERFAMILY RING/U-box 96 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3168 Aev-Chr3 30113956 30116232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3168 14 166 C3H Transcription Factor Family AT4G10150 39.752 1.26e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3168 K19039 - gmx:100806499 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3168 03 30113956 30116232 Aev03g3168 03 30113956 30116232 ECH