Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev03g3163 | ATGGAGGACGCCGAAACAAAGCAGAGAATCGAGGAAACGGTTCGGAGGATTCTGGAAGAATCGGACATGGACAAGGTTACCGAGTCCAAGATTCGTAAGCAGGCCTCCAACGAACTCTCCCTCGACCTCTCCCAACCCCACCTCAAATCCTTCGTCAAGCACGTCGTCGAATCTTTTCTCCAAGAGAAGCAGCAGCAGCAACAAGATGAGGCTGAAGATGCAGAAGAACCAGAAGAAGAAGGTTCCGACGGCAAGGAGTACGATGATGAAGGCAATCTCATCATCTGCAAGCTGTCGGAGAAGAGGAAGGTGACCATTCAGGATTTCAGAGGCAGAACATTGGTCTCCATTCGCGAGTATTTTCGAAAGGACGGAAAGGACCTTCCTACTTCCAAAGGAATAAGTTTGACAGAGGAGCAGTGGTCAGCCTTTAAGAAAAATGTTCCTGCTATAGAGAAAGCCATTAAGAAAATGGAGTCACGCTGA | 486 | 0.4835 | MEDAETKQRIEETVRRILEESDMDKVTESKIRKQASNELSLDLSQPHLKSFVKHVVESFLQEKQQQQQDEAEDAEEPEEEGSDGKEYDDEGNLIICKLSEKRKVTIQDFRGRTLVSIREYFRKDGKDLPTSKGISLTEEQWSAFKKNVPAIEKAIKKMESR* | 162 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev03g3163 | 161 | PANTHER | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR | 4 | 161 | IPR045125 | GO:0003713|GO:0060261 | |
Aev03g3163 | 161 | SUPERFAMILY | ssDNA-binding transcriptional regulator domain | 95 | 157 | IPR009044 | GO:0003677|GO:0006355 | |
Aev03g3163 | 161 | SUPERFAMILY | DEK C-terminal domain | 4 | 61 | - | - | |
Aev03g3163 | 161 | MobiDBLite | consensus disorder prediction | 62 | 89 | - | - | |
Aev03g3163 | 161 | Pfam | Transcriptional Coactivator p15 (PC4) | 96 | 147 | IPR003173 | GO:0003677|GO:0006355 | |
Aev03g3163 | 161 | PANTHER | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP | 4 | 161 | - | - | |
Aev03g3163 | 161 | Pfam | DEK C terminal domain | 5 | 60 | IPR014876 | - | |
Aev03g3163 | 161 | MobiDBLite | consensus disorder prediction | 69 | 86 | - | - | |
Aev03g3163 | 161 | PIRSF | RNA_polymII_KELP | 1 | 161 | IPR017415 | - | |
Aev03g3163 | 161 | Gene3D | - | 2 | 63 | - | - | |
Aev03g3163 | 161 | Gene3D | Transcriptional Coactivator Pc4; Chain A | 84 | 161 | IPR009044 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev03g3163 | Aev-Chr3 | 30093114 | 30094391 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Coactivator p15 | Aev03g3163 | DEK_C | 6.9e-14 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev03g3163 | K25815 | - | gmx:100305633 | 228.794 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev03g3163 | 03 | 30093114 | 30094391 | Aev03g3163 | 03 | 30093114 | 30094391 | ECH |