Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3160 ATGGAAGCGGACGCAGATTTCGTGACGAATGACATGCTCACACTCCCACACGATCCCTTTGATACCATTGACATCGATAATGATAGTCTAGCTATTGAAGGGGAAAGATGTGGAATATGCATGGATATTGTTATTGACAGGGGAGTTCTGGATTGCTGTCAGCACTGGTTCTGCTTTGCATGCATTGACAATTGGGCTACCATCACTAATCTCTGCCCACTTTGCCAGAATGAGTTTCAGTTGATCACTTGTGTTCCAGTATATGATACCATTGGAAGCAATAAAGTTGAAGATGATTCATTCTTCAGGGATGACGAGTGGTCCATTGAAGGGAAGAATAACACACTGTCATTTCCCTCCTACTACATTGATGAAAATGCAGTTACTTGCTTGGATGGCGATGGCTGCAAAGTTCGAAGTGGATCGGCTACTATTGAAGGAGATTCTGGTCTTGATACATCGATTGCTTGTGATTCATGTGATATATGGTATCACGCCTTCTGTGTGGGATTTGATACGGAAAGTACATCTGAAAGTTCATGGCTATGCCCAAGATGTGTGGCTGGTGAAGTTTCTAAAGGAACAGAAACCTACTCAATGGAGAAGGAAAAGGTAGAATTCGACCCAGAGAATAGTAACAGTCCATGTCAGGCTGAGGATTCCTTTTCAGGAAAAGTCTCCGTCTCCGTTGCTGATGCTGGAGAGACAGCTGTGGTTGTCTCACTAGTGGATGGAAATAAATGGGTTCCGTCAACAAGTGAGAAAGGCCAATTTCCTGTTGAAGTTGACCAGGACAGATTGACTGAATCATGTACTTTCACATCGGAAAACACTAATCAGCAAAGCGGGACAGAGGTGATGTTGTCACCAACCAAGGAGGAACAAGAGCTGGAGTTGTCTTTATCACACAATGTATCCTCTAGCCTAACCTCTAAATCCTTGTTGCATAATGATTTAAAGGAAACTGCTCATGTTCCAAGGAGTGAACCAAGTAACCTTGATGAAGTCAAGTTATTTGATGAATCTCATGTTAAAACTAGTCCATCCAAAAATGAATCAGATATGGGTCTTCATCTTGGTTTGTCAGTGGGCTCTTTTCTATCTGTTGATAATGTGGACAAGATTGAAATAAAAGATCAAGCAATTGATGTCCTGTGCTCGAGTCCAGATGTTTCTTTTAAAGGAGATGTAACTAAAACCAATGCTCAGAAGGACAATGCCAGAGTGACTAGTAGGAAGAGAAAACATGTTGATTACAGTCATGATGAAGTTCATATAAAAGTTGATGATGGAGATGTCAAGCCTGAACTTGCAGTTGACATGTCTCGAAAGAAAAGTAGAGCTTCTAGTAGTCAATTGATTAGTGCTAATGAATCAGCTGATGCTCATCTTTCAGACAATGCTCAAAAAACCCCTGCTTTGAAACATTCTCCAGCAAAGGAGGTTGCCAGGCCTGATATAATGAATATAGTTAAAGGTACAAACCGGAGGCTTTCCAAGGAAATTGCAGCCACTAGTGCGACCAATACTTTATCTAAAACGAAAGAAAATATGGCTGGGTTAAGGGTAAAAAAGATCTTGAAGAGAGATGCTGATGATGGAGAATCATCCTTGGTAGTTCAAAATCTAAGAAAGGAAATTAGAGAAGCTGTCCGTAACAAATCCTCTATAAACTTTGAGGAAAATGTTGATACAAAGCTTCTCGCAGCATTCAGGGCTGCTATAACTGTGCCTAAAACTGAACCTGTAAAGTTATCCCCTTCAGCTTTAAAGGCAAAGAAGACAATGTTGCAGAAAGGAACAGTACGTGAGAATCTAACAAAGAAAATATTTGGGACTGCCAATGGAAGAAGAAAGCGTGCATGGGATAGGGACTGTGAAATTGAGTTTTGGAAATACCGGTGCATGAGAGCTACAAAGCCTGAAAAAATTGAAACTTTGAAATCAGTTCTTGATCTACTTAGGAAAAGTTCAGAGAGCCAAGAATCAACAAGTCAGGCCAAGGATACTATTCTTTCCAGGTTGTATTTAGCAGATACATCTGTTTTCCCACGGAAAGATGATGTGAAGCCTCTGTCTGTACTTAAAACCAGTGCTAGCTCAGAACAGACTAAACAAAATAACCCACCAGGAAAAGGGTCAAATTTATCTTGTGAAAACAATACTTCTAAAGCAACAGAGATTAATAACCTTTCATTCAATACCAGAGTTTGTTCCTCTGAAAAGAAGGTAGATAAGAAGGTCGTGAATAGCTCCATTGGTGATAATTCAGCTTCTCGTAAGACATCTGTTTCTTCTTCAGCTGTTGCCAAAGTTGATGTGAAGGGGCTTAAATCAGACTCTACAAAGATTGACAAAAAGAAATGGGCTCTAGAGATACTTGCTAGGAAAACAGCTGCTGAAAGCAAGAACACGGCAAATGAAAGTCAGGAAGACAATGCAGTTTTTAAAGGAAATTATCCTCTGCTTGCCCAATTACCGGCTGATATGCGACCAGTATTAGCCCCTTGTCGCCACAATAAAATTCCAATATCAGTGAGGCAGACACAGCTTTACCGCCTGACAGAGCGCTTGTTGAGGAACACAAATCTGCCAGTCATTCGCAGAACTGCAGATACAGAATTGGCTGTTGCAGATGCAATTAATATAGAAAAGGAGGTTGCTGACAGATCAAATAGCAAGCTTGTATATGTGAACCTCTGTTCACAAGAGCTCTCGCATCGCACAAATAATGCCAAGTCTAATGTTGCTGCAGATACAAATCCACCAGCTCCATCAGCAGAGGTTTCTGATCAATCAGAGCAAAATGCTGATGATACTGTCCCTGAAGCTGAAATAGCCTTGAAAAATGCTGGTCTATTGTCTGATTCACCACCTAGCAGTCCACACGAGAACAAAGATACATCTAATGAAAATGATATGCCAGGGCCTGATAATATATTTGAATTGGATTCTCATCCTGATCTGGATATTTATGGTGACTTTGAGTATGATTTAGAGGATGAAGATTATATTGGGGCTAGTGTTTCAAAGATCTCAAACCCAAAAGCTGAGGAAAGTCAGTCGAAAGTGAAACTGGTATTCTCCACCGTGAACTTGAAAAAGTCAGATACTGCTTTGGATTGTGTAGACTGTAAAGAGTCTGCTAACAATGAAGTGCCACAAGATGCCCCCGGCTCATCAAACTCTCACAATGATGCAGCGCATAAGGACTCAAGGATTGATGCAGAGAGTGGCCAGCCTTCTGTTTCTTCTGAGCTCCCACATTCTGAGAGTGCCATCAAGCCGGCTGATTCCGAGTTTGAAGAGTTATATGGCCCTGAAAAAGAACCCCTCATAAAAAAATTCCCAGATGGTGACTTGAGCAAATTACATGGAGAGGGCAAGACAGAAACACCAAATGAGCCCAATGACTGCCATAATGATGAAAAGCATGTCTTAGACAAAGCAGTAAATGGTTCAGAGACTAGTGAAAATTCCCAAAGGAAGGAAGAGAAATCTGATATGACTGACAAGCAGTCTGACTCCGTAAATCATGTAACTAGAAAGGTAGAAGCTTATATCAAGGAGCATATCAGGCCACTGTGCAAGAGTGGTGTGATAACGGCTGAACAATACAGGTGGGCAGTTGCAAAAACAACTGAGAAGGTGATGAAGTATCATTCCAAAGCAAAGAATGCTAATTTCCTAATAAAGGAAGGTGAGAAAGTAAAGAAACTCGCAGAGCAGTATGCTGAAACAGCTCAACAGAATAAGAAAAATTGA 3765 0.4096 MEADADFVTNDMLTLPHDPFDTIDIDNDSLAIEGERCGICMDIVIDRGVLDCCQHWFCFACIDNWATITNLCPLCQNEFQLITCVPVYDTIGSNKVEDDSFFRDDEWSIEGKNNTLSFPSYYIDENAVTCLDGDGCKVRSGSATIEGDSGLDTSIACDSCDIWYHAFCVGFDTESTSESSWLCPRCVAGEVSKGTETYSMEKEKVEFDPENSNSPCQAEDSFSGKVSVSVADAGETAVVVSLVDGNKWVPSTSEKGQFPVEVDQDRLTESCTFTSENTNQQSGTEVMLSPTKEEQELELSLSHNVSSSLTSKSLLHNDLKETAHVPRSEPSNLDEVKLFDESHVKTSPSKNESDMGLHLGLSVGSFLSVDNVDKIEIKDQAIDVLCSSPDVSFKGDVTKTNAQKDNARVTSRKRKHVDYSHDEVHIKVDDGDVKPELAVDMSRKKSRASSSQLISANESADAHLSDNAQKTPALKHSPAKEVARPDIMNIVKGTNRRLSKEIAATSATNTLSKTKENMAGLRVKKILKRDADDGESSLVVQNLRKEIREAVRNKSSINFEENVDTKLLAAFRAAITVPKTEPVKLSPSALKAKKTMLQKGTVRENLTKKIFGTANGRRKRAWDRDCEIEFWKYRCMRATKPEKIETLKSVLDLLRKSSESQESTSQAKDTILSRLYLADTSVFPRKDDVKPLSVLKTSASSEQTKQNNPPGKGSNLSCENNTSKATEINNLSFNTRVCSSEKKVDKKVVNSSIGDNSASRKTSVSSSAVAKVDVKGLKSDSTKIDKKKWALEILARKTAAESKNTANESQEDNAVFKGNYPLLAQLPADMRPVLAPCRHNKIPISVRQTQLYRLTERLLRNTNLPVIRRTADTELAVADAINIEKEVADRSNSKLVYVNLCSQELSHRTNNAKSNVAADTNPPAPSAEVSDQSEQNADDTVPEAEIALKNAGLLSDSPPSSPHENKDTSNENDMPGPDNIFELDSHPDLDIYGDFEYDLEDEDYIGASVSKISNPKAEESQSKVKLVFSTVNLKKSDTALDCVDCKESANNEVPQDAPGSSNSHNDAAHKDSRIDAESGQPSVSSELPHSESAIKPADSEFEELYGPEKEPLIKKFPDGDLSKLHGEGKTETPNEPNDCHNDEKHVLDKAVNGSETSENSQRKEEKSDMTDKQSDSVNHVTRKVEAYIKEHIRPLCKSGVITAEQYRWAVAKTTEKVMKYHSKAKNANFLIKEGEKVKKLAEQYAETAQQNKKN* 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3160 1254 MobiDBLite consensus disorder prediction 951 993 - -
Aev03g3160 1254 ProSiteProfiles Zinc finger PHD-type profile. 69 189 IPR019787 -
Aev03g3160 1254 Coils Coil 540 560 - -
Aev03g3160 1254 MobiDBLite consensus disorder prediction 696 720 - -
Aev03g3160 1254 Pfam PHD-finger 152 187 IPR019787 -
Aev03g3160 1254 ProSitePatterns Zinc finger RING-type signature. 53 62 IPR017907 -
Aev03g3160 1254 PANTHER RING FINGER PROTEIN 41, 151 107 1251 - -
Aev03g3160 1254 MobiDBLite consensus disorder prediction 439 485 - -
Aev03g3160 1254 MobiDBLite consensus disorder prediction 1093 1151 - -
Aev03g3160 1254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 115 IPR013083 -
Aev03g3160 1254 SUPERFAMILY FYVE/PHD zinc finger 152 189 IPR011011 -
Aev03g3160 1254 Pfam Ring finger domain 36 76 IPR001841 -
Aev03g3160 1254 MobiDBLite consensus disorder prediction 1158 1177 - -
Aev03g3160 1254 MobiDBLite consensus disorder prediction 912 939 - -
Aev03g3160 1254 MobiDBLite consensus disorder prediction 444 472 - -
Aev03g3160 1254 MobiDBLite consensus disorder prediction 397 416 - -
Aev03g3160 1254 MobiDBLite consensus disorder prediction 1049 1177 - -
Aev03g3160 1254 PANTHER RING/U-BOX PROTEIN 107 1251 - -
Aev03g3160 1254 SUPERFAMILY RING/U-box 28 82 - -
Aev03g3160 1254 SMART ring_2 37 75 IPR001841 -
Aev03g3160 1254 SMART PHD_3 135 187 IPR001965 -
Aev03g3160 1254 ProSiteProfiles Zinc finger RING-type profile. 37 76 IPR001841 -
Aev03g3160 1254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 192 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3160 Aev-Chr3 30069733 30077639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3160 31 114 C3H Transcription Factor Family AT2G39100 31.034 9.67e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev03g3160 PHD 6.5e-09 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3160 - - adu:107479708 1776.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3160 03 30069733 30077639 Aev03g3160 03 30069733 30077639 ECH