Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3151 ATGGCTTCCTTGACCCAATTCGGTCTATTCACAATGATCTTTGTTCTCCTTCTCCATGATCTTCACAGCACGAGAGGCCAACGTGTCTGCGACATCATGTCATGCGGCGATATCGAAAACATTCAGTTCCCTTTCGGATTGAAAGGCTCGAAACAAGAATACCGCGAGTGTAGCTATTACTACTACCCAAACCCAAGCTTCCAACTCACCTGCAACAACCTTAGCCAAACAATCCTCACGCTCCCAAACACAGGGGACCTAATCGTCAAAAGCATCGATTACGAGGAACAGGTGATACGAGTCAACGACCCCGATGGATGTCTCCCAAAACTGTTCTTGCAAAACAAATTTAACCTCTCAGGTTCGCCATTCAAATTGAACCCCGCGGTTTATGAAGATTACTTTAACATCACTTTCCTCAATTGCCCCTACAATTGGACCCAATCATCATCGTCTCCATTTATGCCGTCGATTTCTTGCTTGAGCAACATAGGAAGCACGAATTCCTCTTCCTCGTCGTCGCCGTCGGTTATTATATCGTGGTGGTCGCGTCCAATCAAGTCGTCACCGCTGTCTGGAGTGTGCGACGTGATTTCGAGTGCTCTAGTGCCAATACCGACGGCGGATTTGGGTCAGTGGCCGTTCTGGCCTGATCTGACGGCTGATATTGAGTTGTCGTGGAGGGAACCAATGTGTTGGCAGTGTGCAATTAGTGGCCAAGTTTGTGGCTTCGCTAACGATCGTAAAAGTCTTAGTCAAGTTGGATGCTTTTCCAGCCCCTCTAGCAAAAACCAAGGTATTCCAAGAAGCGCCAAATATGGGTTAACCATAGGAGTGGGAGTACCTGGACTATTGTGCTTAATTGGGCTTTGTTGCTTCATATTGGGAAAGGCCAAGATGAACATACATCGAAGAAGGCCCATCACAGAGCTTCCAACAATTTCACTTCAGCCCATCCCTCTTGTAATGGGCCTAGATGGTGACACAATTGAAAAGTATCCCAAGACGCTTCTTGGTGAGAGTGGGCGCTTATTGAAGCCCAGTGACAACACTTGCTCAATTTGCCTCTGTGAATATCAGCCCAAAGAGACTCTGAGGACCATACCCGAGTGCAACCATTATTTTCATGCTGATTGCATTGATGAGTGGCTCAGATTGAATGGCACGTGTCCCTTGTGCAGGAATACACCGGGGGCCTCATCTAGAGTCACCCCTTATTTCTCTTCTCTCTCCCACACTTCATCACTCTCCTCTACACCTTAG 1263 0.4751 MASLTQFGLFTMIFVLLLHDLHSTRGQRVCDIMSCGDIENIQFPFGLKGSKQEYRECSYYYYPNPSFQLTCNNLSQTILTLPNTGDLIVKSIDYEEQVIRVNDPDGCLPKLFLQNKFNLSGSPFKLNPAVYEDYFNITFLNCPYNWTQSSSSPFMPSISCLSNIGSTNSSSSSSPSVIISWWSRPIKSSPLSGVCDVISSALVPIPTADLGQWPFWPDLTADIELSWREPMCWQCAISGQVCGFANDRKSLSQVGCFSSPSSKNQGIPRSAKYGLTIGVGVPGLLCLIGLCCFILGKAKMNIHRRRPITELPTISLQPIPLVMGLDGDTIEKYPKTLLGESGRLLKPSDNTCSICLCEYQPKETLRTIPECNHYFHADCIDEWLRLNGTCPLCRNTPGASSRVTPYFSSLSHTSSLSSTP* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3151 420 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 418 - -
Aev03g3151 420 CDD RING-H2_PA-TM-RING 351 394 - -
Aev03g3151 420 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 322 398 IPR013083 -
Aev03g3151 420 Pfam Wall-associated receptor kinase galacturonan-binding 30 103 IPR025287 GO:0030247
Aev03g3151 420 ProSiteProfiles Zinc finger RING-type profile. 352 394 IPR001841 -
Aev03g3151 420 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 8 418 - -
Aev03g3151 420 Pfam Ring finger domain 350 394 IPR001841 -
Aev03g3151 420 SUPERFAMILY RING/U-box 345 398 - -
Aev03g3151 420 SMART ring_2 352 393 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3151 Aev-Chr3 30024277 30027094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3151 22 398 C3H Transcription Factor Family AT2G46495 33.943 1.04e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3151 - - gmx:100810240 426.787