Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3141 ATGGAAGCAGAAGAAGCAGGAATGAAAGAAAGAAACGCAGGGCTTGATATGGGGTCGAGCTTATCAAATCTGATACTGTCATCTGGCGGCTCAAACACCTTGGACTCAATCTTCTCTCATTGCCCCCAACCCCAAACTAATGCTGCTGCCACCATCCCCATCTCGGACCCTTTATCTCTGGGCTCCTCCGTCTACCTTCGCCAAAGAGACATCCTCCAAAAGCTCTTCGACCAGACCAACAAGGTTAATAATAATAATAATGGCTCTTTCGTTCCCTCCTCCTCGAGAACTCCATTGATGAGGCCTTGCAGCAATAGCAAGAAGAAGCTGTACAGGGGAGTGAGGCAGAGGAACTGGGGAAAATGGGTGGCAGAGATCAGACTCCCTCAGAACAGAATGAGGGTGTGGCTTGGCACTTACGACACCCCTGAAGCCGCTGCTTATGCCTACGATCGAGCCTCTTACAAGCTCCGCGGCGAATACGCGCGCTTGAATTTCCCAACCCTCAAGGAACTACCCACTCACATGACATTGTTAGCTTCCGAAGATTCTGCCAGATTGAGCGCTTTGAGGAGCTACGTTGATGCCAAGATTCATGCCACGTGTCAGAAGGTGAAGAGGGACAAGGCCAAGAAGAAGGCTCATTGTGGTGGTGCTGACGCAGCCGAGAGTGAGAAACCGCAGAAGGAGGTGGATCAGTCATCGTCTTGTTCGTTACCGCCGTCGCCAACGGTTTCTTCCGACGGGGGGTTTGTTTCGCAGAGCGTTTCAGAGTACTGCTCGCCATGCTCTGTTTCAAGTTCAACAGAGTGTGCAGCAATGGGAACAGAGGATTTTTCTGATTTCATCGAAAACTGTTCCTTCGAATTGGAAAGGATGCCATCCTTCGATCCCGAGTTTATTTGGCAAGTTTTAACGAATTAG 924 0.5011 MEAEEAGMKERNAGLDMGSSLSNLILSSGGSNTLDSIFSHCPQPQTNAAATIPISDPLSLGSSVYLRQRDILQKLFDQTNKVNNNNNGSFVPSSSRTPLMRPCSNSKKKLYRGVRQRNWGKWVAEIRLPQNRMRVWLGTYDTPEAAAYAYDRASYKLRGEYARLNFPTLKELPTHMTLLASEDSARLSALRSYVDAKIHATCQKVKRDKAKKKAHCGGADAAESEKPQKEVDQSSSCSLPPSPTVSSDGGFVSQSVSEYCSPCSVSSSTECAAMGTEDFSDFIENCSFELERMPSFDPEFIWQVLTN* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3141 307 SUPERFAMILY DNA-binding domain 110 168 IPR016177 GO:0003677
Aev03g3141 307 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Aev03g3141 307 PRINTS Ethylene responsive element binding protein signature 111 122 IPR001471 GO:0003700|GO:0006355
Aev03g3141 307 MobiDBLite consensus disorder prediction 216 230 - -
Aev03g3141 307 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 13 307 - -
Aev03g3141 307 MobiDBLite consensus disorder prediction 216 242 - -
Aev03g3141 307 SMART rav1_2 110 173 IPR001471 GO:0003700|GO:0006355
Aev03g3141 307 ProSiteProfiles AP2/ERF domain profile. 110 167 IPR001471 GO:0003700|GO:0006355
Aev03g3141 307 MobiDBLite consensus disorder prediction 82 102 - -
Aev03g3141 307 Pfam AP2 domain 111 159 IPR001471 GO:0003700|GO:0006355
Aev03g3141 307 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 13 307 - -
Aev03g3141 307 CDD AP2 109 167 IPR001471 GO:0003700|GO:0006355
Aev03g3141 307 Gene3D AP2/ERF domain 110 169 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3141 Aev-Chr3 29967414 29968337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3141 16 307 AP2-EREBP Transcription Factor Family AT1G64380 43.373 9.67e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev03g3141 AP2 3.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3141 - - gmx:100815913 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3141 03 29967414 29968337 Aev03g3141 03 29967414 29968337 ECH