Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3138 ATGGAGGAAGATTGGCGCTGGGAGCAGAACACGCTCATCAATGAGCTAATTCAGGGTATGGAGGTAGCAAGAAAGTTGAAGGCAGACCTGAGGACACCATATTCAGCTGACTCAAGGGATTTAATGGTGCAGAGGATATTGTCTTCTTATGAAAAGGCTCTGCTAATTCTAAGATGGAATGCACCAACTTCCAAGTCACAGAACATGAATCAAGCAATGACAACTCTCTTACCTGAGTCCCCAATATCTGTCAGTGGAGGAAGTCCTCTGAGCGAGGATGTTGATGGGGCCAGCAAGGACTCAAAGAAAAGAAAGACAATGCCTAAATGGGTGGATCAAGTACGAGTGAGCTCTGAGAGTGGTCTTGTAGGACCACATGAAGATGGCTACAATTGGAGAAAATATGGACAGAAAGATATCCTTGGGGCCAAATATCCCAGAAGCTATTATAGGTGCACCTTCCGCAACACTCAGGGATGCTGGGCCACAAAGCAAGTACAGAGATCCGATGAAGATCCCACCATATTTGACATAACTTACAAAGGAAAGCATACCTGTTCTCAGGGAAACAATGCTGTTCTTCCACCAAAGTCACCTGAAAAACATGAGAAAAAGCAGTCTCATAATAATGATATTCACCAAGCACAGCCATCACAAGAAAGCCTTACAAATTTCGGGAGCATAGTGGACATCGACCCGAATTTCCCTTTCAATAACCCAGGATTTTTCTCCTAG 735 0.4435 MEEDWRWEQNTLINELIQGMEVARKLKADLRTPYSADSRDLMVQRILSSYEKALLILRWNAPTSKSQNMNQAMTTLLPESPISVSGGSPLSEDVDGASKDSKKRKTMPKWVDQVRVSSESGLVGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYKGKHTCSQGNNAVLPPKSPEKHEKKQSHNNDIHQAQPSQESLTNFGSIVDIDPNFPFNNPGFFS* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3138 244 Gene3D WRKY domain 111 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev03g3138 244 ProSiteProfiles WRKY domain profile. 121 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g3138 244 MobiDBLite consensus disorder prediction 80 111 - -
Aev03g3138 244 SUPERFAMILY WRKY DNA-binding domain 124 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev03g3138 244 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 231 - -
Aev03g3138 244 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g3138 244 MobiDBLite consensus disorder prediction 187 221 - -
Aev03g3138 244 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 231 IPR044810 GO:0003700
Aev03g3138 244 MobiDBLite consensus disorder prediction 95 110 - -
Aev03g3138 244 Pfam WRKY DNA -binding domain 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3138 Aev-Chr3 29948307 29949570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3138 7 203 WRKY Transcription Factor Family AT4G23810 47.368 2.30e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev03g3138 WRKY 3.7e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3138 - - gmx:100815760 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3138 03 29948307 29949570 Aev03g3138 03 29948307 29949570 ECH
Aev03g3138 03 29948307 29949570 Aev08g0832 08 4869731 4871214 ECH
Aev03g3138 03 29948307 29949570 Aev02g0193 02 1452325 1454975 ECH