Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3134 ATGGTAAATAATCTCTCTATCAACGGTCGAATCTTCAATCTCACTTTCTCTTCCAAGTTCAAAAAATCCGACCGTTGCTTGGACCGACTCACCTATAAAATAAGACCCCGCTCTTCTGTATTCTACACACCAAACAAGAACCCTTCACAGAATACTCTGTTTTTCTCTCATTTTTTAAATTCTCTCTTCGTCTTGGCATCCATGGCTGACACAGTTGCAGAAGTGCCCACAAAGAGGGCAAGAAGCAAAAGGGCACTCAAGGACAAGAACTCATCAACAAAAACTAATGAGAACGCCACCACCATCATCAAGGTCACAGATTCTACAACACCACCAATTTTGCTTGTGCCGTCTGTTGAAGTGGCCAAGGAGAACACCGAAACCACTCTTTCTCAGCCCAAGAAAGGAGGAAGAGGTGCCTCAAAGAAACAACAGAGCGCCAAGCAGCAACAGCAACAATCTTCCTTTGAGAAAGACTTTCTTGAAATGCAAGAGAAGCTGCAGCAGCTGCGCCTCGAGAAGGAAAAAACAGAGGAGCTCTTGAAGGCCAAAGATGAGGCCCTCAAGCAGAAGGAGCAGGAGCAGGAGAAGCTTCAGATGGAGTTCAAGAAACTCCAGAAGCTGAAGGAGTTCAAACCCAACATGGATTTGCCTGTGCTGAAAGACATGGAGCAAGAGAAGAAGGGCAAGAAGAAGAACGGGTGCCCTGAGAAGAAGAGGCCTTCTCCTCCTTACGTTCTCTGGTGCAAAGATCAATGGAATGAGGTTAAGAAAGCGAACCCAGAGGCAGAGTTTAAGGACATTTCAAACATGTTGGGTGCAAAATGGAAGACCGTTAGCGCAGAAGAAAAGAAGCCTTATGAGGAGAAGTACCATGCTGAGAAAGAGGCTTATCTGCTGGTGATTGCAAAGGAGAAGCGTGAGAGTGAGGCAATGAAGCTTTTGGAAGAGGAGCAGAAGCAGAGGATTGCGATGGAACTGCTTGAACAATACATGCAGTTCAAACAGGAAACAGAGAAAGAGAAGAAGAAGGAGACCAAGAAGAGCAAGAAAGAGAAGGACCCATCGAAACCAAAGCACCCTGTGTCAGCTTATATCCTGTTCACGAACGAGAGGCGTGCGGCGCTTGTTGCAGAGAACAAGAGCGTCGTCGAGGTTGCCAAGATCACAGGGGAAGAGTGGAAGAACATGACAGAGGAACAGAGGAGGCCTTATGAAGAGGTTGCAAAGAAGAACAAGGAGCTATATTTCCAAGAAATGGAGGCTTACAGGCAGAAGAAAGATGAGGAGGCTGCCCATCTGATGAAGGAAGAGGAGGAACACATGAAGCTTCAGAAACAGGAAGCTATGCAACTTCTCAAGAAGAAGGAGAAAACTGAAAATCTCATCAAGAAAACAAAAATGAATCGGCAGAAGAAGAAGCAGAGCAAGGAAGAAAAGAGTTGTGACCCAAACAAGCCCAAGAGGCCTCCATCTTCATTCCTCGTATTCAGCAAAGAAGCAAGGAAGAGTTTGCAAGAGGAGCGACCAGGAATCACTACCTCCACCCTTAATGCACTGATTTCGTTGAAGTGGAAGGAGCTGAGTGAGGAAGAAAGACAAATGTGGAATGGAAAAGCTGCAGAAGCAATGGAAGCATACAAGAAGGAATTGGAGGAATACAACAAATCTGTTGCTGCTGCAGCAAGCCAGGGGAAGGAGGAAAACTGA 1710 0.4596 MVNNLSINGRIFNLTFSSKFKKSDRCLDRLTYKIRPRSSVFYTPNKNPSQNTLFFSHFLNSLFVLASMADTVAEVPTKRARSKRALKDKNSSTKTNENATTIIKVTDSTTPPILLVPSVEVAKENTETTLSQPKKGGRGASKKQQSAKQQQQQSSFEKDFLEMQEKLQQLRLEKEKTEELLKAKDEALKQKEQEQEKLQMEFKKLQKLKEFKPNMDLPVLKDMEQEKKGKKKNGCPEKKRPSPPYVLWCKDQWNEVKKANPEAEFKDISNMLGAKWKTVSAEEKKPYEEKYHAEKEAYLLVIAKEKRESEAMKLLEEEQKQRIAMELLEQYMQFKQETEKEKKKETKKSKKEKDPSKPKHPVSAYILFTNERRAALVAENKSVVEVAKITGEEWKNMTEEQRRPYEEVAKKNKELYFQEMEAYRQKKDEEAAHLMKEEEEHMKLQKQEAMQLLKKKEKTENLIKKTKMNRQKKKQSKEEKSCDPNKPKRPPSSFLVFSKEARKSLQEERPGITTSTLNALISLKWKELSEEERQMWNGKAAEAMEAYKKELEEYNKSVAAAASQGKEEN* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3134 569 MobiDBLite consensus disorder prediction 77 91 - -
Aev03g3134 569 MobiDBLite consensus disorder prediction 213 241 - -
Aev03g3134 569 SMART hmgende2 237 307 IPR009071 -
Aev03g3134 569 SMART hmgende2 486 556 IPR009071 -
Aev03g3134 569 SMART hmgende2 357 425 IPR009071 -
Aev03g3134 569 Coils Coil 160 208 - -
Aev03g3134 569 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 238 306 IPR009071 -
Aev03g3134 569 CDD HMGB-UBF_HMG-box 239 303 - -
Aev03g3134 569 SUPERFAMILY HMG-box 345 430 IPR036910 -
Aev03g3134 569 MobiDBLite consensus disorder prediction 335 359 - -
Aev03g3134 569 Pfam HMG (high mobility group) box 358 424 IPR009071 -
Aev03g3134 569 Pfam HMG (high mobility group) box 239 299 IPR009071 -
Aev03g3134 569 Pfam HMG (high mobility group) box 487 555 IPR009071 -
Aev03g3134 569 Coils Coil 537 564 - -
Aev03g3134 569 Coils Coil 420 469 - -
Aev03g3134 569 MobiDBLite consensus disorder prediction 122 156 - -
Aev03g3134 569 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 358 424 IPR009071 -
Aev03g3134 569 Gene3D High mobility group box domain 467 567 IPR036910 -
Aev03g3134 569 Gene3D High mobility group box domain 341 438 IPR036910 -
Aev03g3134 569 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 73 563 IPR044601 GO:0003677
Aev03g3134 569 CDD HMGB-UBF_HMG-box 358 421 - -
Aev03g3134 569 Coils Coil 324 348 - -
Aev03g3134 569 SUPERFAMILY HMG-box 483 557 IPR036910 -
Aev03g3134 569 MobiDBLite consensus disorder prediction 213 238 - -
Aev03g3134 569 Gene3D High mobility group box domain 229 301 IPR036910 -
Aev03g3134 569 MobiDBLite consensus disorder prediction 118 156 - -
Aev03g3134 569 MobiDBLite consensus disorder prediction 335 363 - -
Aev03g3134 569 CDD HMGB-UBF_HMG-box 487 552 - -
Aev03g3134 569 MobiDBLite consensus disorder prediction 434 510 - -
Aev03g3134 569 MobiDBLite consensus disorder prediction 77 102 - -
Aev03g3134 569 MobiDBLite consensus disorder prediction 434 486 - -
Aev03g3134 569 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 487 555 IPR009071 -
Aev03g3134 569 SUPERFAMILY HMG-box 226 300 IPR036910 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Aev03g3134 HMG_box 2.2e-16 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3134 K09273 - gmx:100783033 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3134 03 29932055 29934160 Aev03g3134 03 29932055 29934160 ECH