Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3126 ATGGCTGCGCCTTCTTCAACCAAGCACACTCATCACCTCAACCACACCAACCTTTTCACCAAACAAATGAACAAGCCTCCTTATCCCAGACTCATACGAATACGCGTCGCCGACGGAGACGCCACCGCCACCGACTCATCCAGCGACGAAGAAGAACCACCCTCTGTTTCATCCTCCTTCACGCGCCGCCGAGTCAAGAACTTCGTCAACGAGATCACTATTCACTCTGTTAGCAACACTACTGACGGCCCTGCTGCCCTTGCTTCTAAGAAGAGGAGGAGGCCCAAGTGCGCCGCCTCCGGAGCTCCGGCGAGGCGGCGGGAGGGCAAGCTATTCTCCGGCAGGAAGTTCAGGGGAGTGAGGCAGCGGCCCTGGGGGAAGTGGGCAGCGGAGATAAGGGACCCGTCTCGGCGCGTGAGGCTCTGGCTCGGAACCTACGACACGGCAGAGGAAGCCGCCATGGTGTACGACAACGCTGCCATTCAGCTCCGCGGCGCTGACGCACTCACCAATTTCATTTCGCCGCCGGCGCCGGAGAACAAAAAGTCCGGGTACAATTCCGGCGAAGAGTCCGGAAACAACAGCAGCAGCAGCAACAACAACCTTCCATCTCCCACTTCAGTTTTTCATCAGTGTTGTTCGTTTTCCGAGGAAGGTGAATCAGTAACCGCCACCAGAGAGGATGTGGGTGATCGAGCGAGTGAATGTGAGGAATATTCGTGCGAGTCAGTGTTTCCGATTCAAAATATGAGTGAGATGGCATCACTATTTGAGTTCGAAACAGAGGATGTGTTCATGACTGTAACAGAGAGTGCTCTGTTCAGCGATGATCATGTGTTCCTCACTTCTTGTGACAGTCTCGATTTCGGTTTTAGCAGTTGGCATAGTAGAGATGATGGTGATGACTGTTTCCAAGATATTGGGGATTTCTTCGTTTCGGATCCTCTTTTGGCTCTCTGA 960 0.5375 MAAPSSTKHTHHLNHTNLFTKQMNKPPYPRLIRIRVADGDATATDSSSDEEEPPSVSSSFTRRRVKNFVNEITIHSVSNTTDGPAALASKKRRRPKCAASGAPARRREGKLFSGRKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAAMVYDNAAIQLRGADALTNFISPPAPENKKSGYNSGEESGNNSSSSNNNLPSPTSVFHQCCSFSEEGESVTATREDVGDRASECEEYSCESVFPIQNMSEMASLFEFETEDVFMTVTESALFSDDHVFLTSCDSLDFGFSSWHSRDDGDDCFQDIGDFFVSDPLLAL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3126 319 MobiDBLite consensus disorder prediction 176 204 - -
Aev03g3126 319 SUPERFAMILY DNA-binding domain 116 172 IPR016177 GO:0003677
Aev03g3126 319 MobiDBLite consensus disorder prediction 79 107 - -
Aev03g3126 319 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-LIKE 5 316 - -
Aev03g3126 319 MobiDBLite consensus disorder prediction 1 23 - -
Aev03g3126 319 PIRSF PTI6 205 290 IPR017392 GO:0003700
Aev03g3126 319 PIRSF PTI6 5 219 IPR017392 GO:0003700
Aev03g3126 319 MobiDBLite consensus disorder prediction 48 62 - -
Aev03g3126 319 Pfam AP2 domain 116 165 IPR001471 GO:0003700|GO:0006355
Aev03g3126 319 MobiDBLite consensus disorder prediction 40 62 - -
Aev03g3126 319 MobiDBLite consensus disorder prediction 172 204 - -
Aev03g3126 319 MobiDBLite consensus disorder prediction 1 26 - -
Aev03g3126 319 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Aev03g3126 319 PRINTS Ethylene responsive element binding protein signature 139 155 IPR001471 GO:0003700|GO:0006355
Aev03g3126 319 CDD AP2 116 172 IPR001471 GO:0003700|GO:0006355
Aev03g3126 319 ProSiteProfiles AP2/ERF domain profile. 116 173 IPR001471 GO:0003700|GO:0006355
Aev03g3126 319 SMART rav1_2 116 179 IPR001471 GO:0003700|GO:0006355
Aev03g3126 319 Gene3D AP2/ERF domain 115 174 IPR036955 GO:0003700|GO:0006355
Aev03g3126 319 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3126 Aev-Chr3 29892746 29893705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3126 8 319 AP2-EREBP Transcription Factor Family AT4G23750 39.769 3.74e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev03g3126 AP2 6.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3126 - - ahf:112732493 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3126 03 29892746 29893705 Aev03g3126 03 29892746 29893705 ECH
Aev05g1020 05 7185540 7186526 Aev03g3126 03 29892746 29893705 PCT