Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3113 ATGGAACAGAAAAGCATTCTGCTATCGGCGCTGGGTGTAGGGGTGGGAGTGGGAGTGGGACTTGGATTGGCTTCAGGACAGAGCGTTGGGAAATGGGGAACCAACTCTTATTCCTCAAACACTGTCACTGCTGAGAAGATGGAGCAGGAAATGCTCCGACAAGTTGTTGATGGCAGAGAAAGCAACGTCACCTTTGATAAATTCCCTTATTATCTCAGGCATCCCCTACTTCTACCAAACTCTCCTGCCTTCCCTCTTATTCTTATTCTGTTCTGTTCTGATTTTTCTTTAACACTCTGTGAACAGACACGGGTTCTGCTCACAAGTGCTGCTTATGTCCATTTGAAGCATGCTGATGTTTCTAAATACACACGGAATCTTGCTCCTGCTAGCCAAACTATTCTGCTTTCAGGGCCAGCAGAACTATATCAGCAGATGCTTGCAAAGGCTTTAGCTCATTACTTTGAGGCAAAGTTGCTTCTGTTAGATTTAACTGACTTTTCATTGAAGATTCAGAGTAAATATGGTTGTGGAAATAAAGAATCTTCTTTCAAAAGATCTACTTCAGAGACAACTTTGGAGCGATTATCTGACCTGTTTGGGTCATTTTCAATCTTCCAACAGAGGGAGGAACCTAAAGGAAAAATGCACAGGCAGAGCAGTGGAACAGACCTTCAATCAATGGGAGGTGAAGGATCTTGTAATCCTCCAAAGCTCCGTAGGAATGCTTCTTCCACTTCAAATATTAACAACCTTGCTTCGCAGAGCAATCCTACAAATCCAGCTCCTCTGAAGCGCACAGCCAGCTGGTCTTTTGATGAAAAGCTTCTTATACAGTCTCTATACAAGGTTCTGGTTTTTGTGTCGAAAACCTATCCCATTGTGGTATATCTGCGGGACGTTGACAAGCTATTATACAGATCACAAAGGATATATAACCTGTTCCAGAAAATGTTGAAGAAACTATCTGGACCAATTCTGATTCTTGGTTCACAAGTTGTGGAATCTGGTAATGACTATGGGGAGGTTGATGAGAGACTAAATTCACTCTTCCCATACACCATAGAGGTCAGGCCCCCGGAAGATGAATCACATCTTGTCAGCTGGAAGTCTCAATTGGAAGAAGATATGAAGAAGATACAAGTTCAGGATAACAAGAACCATATCATGGAGGTACTTTCTGCCAATGATCTTATCTGTGATGACCTGGATTCCATCTGTGTGGCAGACACAATGGTCCTCAGTAACTACATAGAAGAGATTATTGTCTCGGCTATTTCTTACCATCTGATGAAAAACAAAGACCTTGAATACAGAAATGGAAAACTTGTTATTTCTTGCAACAGTTTGTCCCATGCCTTGGGTATATTCCACAAGGGAAAAACCACTGGAAGAGATGCATCGAAAGTGGAAGATCAAGCTGTAAAATCTGAGGTGCAAAAAGGGGAGGGAACTGTTACGAAGCCAGAGACAGCTAAGTCCGAAGATGCTTCTCCAGTAAAAAAACCGGGAGCAGATACATCAACTTCAGTGGCACAGGAAGAAGGTAAAAACTCGGTTCCGGCATCCAAAGCTTCGGAAGTTCCTCCTGATAATGAGTTTGAGAAGCGAATAAGGCCAGAGGTAATTCCAGCAAATGAGATTGGTGTCTCATTCTCTGATATTGGTGCCTTAGAAGAGACCAAAGAATCCCTTCAAGAGCTAGTAATGCTTCCTCTTCGAAGGCCAGACCTTTTCACCGGAGGCCTTCTGAAGCCATGTAGAGGAATATTGCTATTTGGACCTCCTGGCACTGGCAAGACGATGCTGGCAAAGGCCATCGCAAAGGAGGCCGGTGCAAGCTTCATAAATGTGTCGATGTCCACCATCACTTCTAAATGGTTTGGTGAAGATGAGAAGAATGTCCGAGCCTTGTTCACACTTGCGGCCAAGGTCTCCCCAACCATTATATTTGTGGATGAGGTTGATAGCATGCTCGGCCAGAGGACCCGAGTTGGGGAGCATGAAGCCATGCGGAAAATCAAGAATGAATTTATGGCACATTGGGATGGGCTTATGACAAAACCAGGGGAGCGCATTCTTGTTCTTGCTGCAACCAATAGGCCATTTGACCTGGATGAAGCTATTATTAGGCGTTTCGAAAGGAGAATTATGGTGGGGCTACCATCTGTTGAGAACAGGGAGAAGATTTTGAGGACTCTTCTGGCAAAAGAGAAGGTGGACGAGGAGCTTGATTTTAAGGCGCTAGCAACTATGACAGAAGGATATACTGGAAGTGATCTTAAGAACTTGTGCACAACTGCTGCTTATCGACCTGTTAGAGAATTAATTCAGCAAGAGAGGCTAAAGAATATGCAGCAAAAGCAGAAAGCTGCCAAGGAACAGGACATAACACAAGGAGGACAATCTAAGGCAGGAAATAGCCAAGATGCTGCGGCGGCGGAAGATAAACAAGAGAGAGTTATTACCCTTAGACCATTGAACATGCAGGATTTCAGAGAGGCAAAGAATCAGGTCGCTGCAAGCTTTTCAGCTGAGGGGGCCGGCATGAGTGAGTTGAAACAATGGAACGATTTATATGGTGAAGGTGGTTCAAGGAAACAACAGCAGTTAACCTACTTCCTATGA 2628 0.441 MEQKSILLSALGVGVGVGVGLGLASGQSVGKWGTNSYSSNTVTAEKMEQEMLRQVVDGRESNVTFDKFPYYLRHPLLLPNSPAFPLILILFCSDFSLTLCEQTRVLLTSAAYVHLKHADVSKYTRNLAPASQTILLSGPAELYQQMLAKALAHYFEAKLLLLDLTDFSLKIQSKYGCGNKESSFKRSTSETTLERLSDLFGSFSIFQQREEPKGKMHRQSSGTDLQSMGGEGSCNPPKLRRNASSTSNINNLASQSNPTNPAPLKRTASWSFDEKLLIQSLYKVLVFVSKTYPIVVYLRDVDKLLYRSQRIYNLFQKMLKKLSGPILILGSQVVESGNDYGEVDERLNSLFPYTIEVRPPEDESHLVSWKSQLEEDMKKIQVQDNKNHIMEVLSANDLICDDLDSICVADTMVLSNYIEEIIVSAISYHLMKNKDLEYRNGKLVISCNSLSHALGIFHKGKTTGRDASKVEDQAVKSEVQKGEGTVTKPETAKSEDASPVKKPGADTSTSVAQEEGKNSVPASKASEVPPDNEFEKRIRPEVIPANEIGVSFSDIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRTLLAKEKVDEELDFKALATMTEGYTGSDLKNLCTTAAYRPVRELIQQERLKNMQQKQKAAKEQDITQGGQSKAGNSQDAAAAEDKQERVITLRPLNMQDFREAKNQVAASFSAEGAGMSELKQWNDLYGEGGSRKQQQLTYFL* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3113 875 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 550 785 IPR027417 -
Aev03g3113 875 Pfam ATPase family associated with various cellular activities (AAA) 590 720 IPR003959 GO:0005524|GO:0016887
Aev03g3113 875 MobiDBLite consensus disorder prediction 462 478 - -
Aev03g3113 875 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 94 875 - -
Aev03g3113 875 MobiDBLite consensus disorder prediction 503 520 - -
Aev03g3113 875 MobiDBLite consensus disorder prediction 210 263 - -
Aev03g3113 875 MobiDBLite consensus disorder prediction 784 820 - -
Aev03g3113 875 ProSitePatterns AAA-protein family signature. 693 712 IPR003960 GO:0005524|GO:0016887
Aev03g3113 875 Gene3D - 549 721 IPR027417 -
Aev03g3113 875 Pfam AAA+ lid domain 744 785 IPR041569 -
Aev03g3113 875 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 73 - -
Aev03g3113 875 MobiDBLite consensus disorder prediction 461 532 - -
Aev03g3113 875 MobiDBLite consensus disorder prediction 238 263 - -
Aev03g3113 875 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 376 IPR027417 -
Aev03g3113 875 Gene3D - 722 805 - -
Aev03g3113 875 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 73 - -
Aev03g3113 875 CDD AAA 588 721 - -
Aev03g3113 875 MobiDBLite consensus disorder prediction 784 809 - -
Aev03g3113 875 SMART AAA_5 586 723 IPR003593 -
Aev03g3113 875 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 94 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3113 Aev-Chr3 29794934 29799575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3113 550 799 Calmodulin-binding Proteins AT3G56690 36.759 1.95e-42 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3113 - - gmx:100807464 1397.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3113 03 29794934 29799575 Aev03g3113 03 29794934 29799575 ECH