Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3104 ATGGATGAGGTTGCTTACTTTATGGACTGGGATTTGGAAGCAGTTGTGAGAGGGTGTTCCTATTCCACTGAACCAGCCCCCACCACCACCATGGAACATCCATTCATCCGGGATGCTTTTATTTCCCCTAATAATAATAATTTCAATTTCAATTTCTGTCCAGAAGATGAGGAGGATATGTTTTTCAGTAGTTTTCCTGAGTTCTCAGAGAGCACAAGGGTAGTCCTTGACGAATTGGAAGAGCTGTACAAGCCATTCTACCCCTCATCACTTTTGCACTCTACTACTCTACATCTTTCCCCTCATCATCATGATGAGGCTACTGCTATTGTCACAGCGAATCCGCAACCAATAATAATGGCCAAAGAAGAAGAAGAACAAGATAATAATGTCAAAGTCAAACCACCACCATCATCATCATCATCAGAGAAAGTAGTAGTAGCTCCTCCTCCTCCACAACAATCGCAACAAGTTATTATTCCTTCGTCTTCAGTAGTATCTAATAAATCCAAGAGAAGGAAGAAGAGTGTGAACAAGAGAGTGGTGAAGAAGGTAACAGCGGGAGAAATAGGAGGAGGGGGATGTGATGCATGGGCATGGAGAAAATACGGGCAGAAGCCAATAAAGGGGTCGCCGTATCCGAGAAGCTATTACAGGTGCAGCAGTTCCAAAGGGTGCCTGGCGAGGAAGCAGGTGGAGAGGAACCCTATGGAGGCCGGAGAGTTCTTGGTGACCTACACCGCAGACCACAACCATCCTCACCCTACTCGAAGGAACTCCCTCGCCGGCAGTACCCGCCTCAAGACGACGACTACTACTTGTTCTTCTGCTTCGAATTCTTGTGCTGTGAGGAGTGTCTCTCCGAGGACACCTTTAGTGGTGCAGTCCGTGTCCATGGATGAACACAATAACAATAATAATGCTGTCAGTGTCACCACCACAAGTATTAGTAGTAGTAATAAGGGTTTGAAAGAGGATGCAGACTTTGTTGAATTGTTGGATGGTGCTGCTGCTCATCATTATTGGTTTCCAAAGACACAAGAGAAGGATACTAATAATAATATTATTGATGAGGAAATGATGCTGGGACTTGACTACCGACTACTTGAAATTGAAATACAAGAAGAAGAAGAAGATGGCTGCCATTTCATGGACCACGATTCTGCTGCTGCTGCCACTTATTAG 1185 0.4481 MDEVAYFMDWDLEAVVRGCSYSTEPAPTTTMEHPFIRDAFISPNNNNFNFNFCPEDEEDMFFSSFPEFSESTRVVLDELEELYKPFYPSSLLHSTTLHLSPHHHDEATAIVTANPQPIIMAKEEEEQDNNVKVKPPPSSSSSEKVVVAPPPPQQSQQVIIPSSSVVSNKSKRRKKSVNKRVVKKVTAGEIGGGGCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNPMEAGEFLVTYTADHNHPHPTRRNSLAGSTRLKTTTTTCSSASNSCAVRSVSPRTPLVVQSVSMDEHNNNNNAVSVTTTSISSSNKGLKEDADFVELLDGAAAHHYWFPKTQEKDTNNNIIDEEMMLGLDYRLLEIEIQEEEEDGCHFMDHDSAAAATY* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3104 394 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 308 - -
Aev03g3104 394 MobiDBLite consensus disorder prediction 248 272 - -
Aev03g3104 394 SUPERFAMILY WRKY DNA-binding domain 196 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev03g3104 394 SMART WRKY_cls 194 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g3104 394 MobiDBLite consensus disorder prediction 257 272 - -
Aev03g3104 394 Pfam WRKY DNA -binding domain 196 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g3104 394 ProSiteProfiles WRKY domain profile. 196 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev03g3104 394 MobiDBLite consensus disorder prediction 122 157 - -
Aev03g3104 394 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 308 IPR044810 GO:0003700
Aev03g3104 394 MobiDBLite consensus disorder prediction 132 157 - -
Aev03g3104 394 Gene3D WRKY domain 192 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3104 Aev-Chr3 29726037 29727358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3104 9 290 WRKY Transcription Factor Family AT4G01250 40.283 1.26e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev03g3104 WRKY 4.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3104 K13425 K13426 gmx:102663255 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3104 03 29726037 29727358 Aev03g3104 03 29726037 29727358 ECH
Aev03g3104 03 29726037 29727358 Aev05g2856 05 29534107 29535605 ECH