Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3095 ATGAATAATCCTCCGCCGGTTTGTGCGTGCACCTCAAGAGTAGGACGGCTGGTCAAGCGGATCTCTCTATCAGGAGCTTGCATCGAAGTTTTGAGAGCCTCATCTTGCCGCCCCAACCTTGTAACCATGATCATTCCAGAGAAGAACCGCAAGGAGATATGCAAATACCTCTTCCAAGAGGGAGTTTGCTATGCGAAAAAGGATTTCAATTTGGCGAAGCACCCAGAGATTGATGTGCCGAATCTACAGGTGATTAAGCTGATGCAGAGCTTCAAGTCAAAGGAATATGTGCGTGAAACCTTTGCTTGGATGCACTATTACTGGTTCCTCACCAATGATGGCATTGAGCACCTCAGAACTTACCTCAATCTTCCTTCAGAAATTGTCCCTGCAACTCTGAAGAAACAGGCCAAGCCTGCTGGTAGACCATTTGGTGGCCCACCTGGTGATCGCCCCAGGGGTCCACCACGCTTTGAAGGAGAACGTAGATTCGGTGACCGTGATGGATACCGTGGAGGTCCCCGAGGCCCTGGCGGTGATTTTGGAGGAGACAAAGGAGGAGCACCTGCAGACTACAGACCTTCTTTCGGGGGTTCTGGCGGTAGACCTGGCTTTGGGCGTGGATCTGGTGGTTATGGAGCGCCAACTAGCTCAAATCAATCTTAA 666 0.5075 MNNPPPVCACTSRVGRLVKRISLSGACIEVLRASSCRPNLVTMIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGSGGRPGFGRGSGGYGAPTSSNQS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3095 221 Pfam Plectin/S10 domain 45 136 IPR005326 -
Aev03g3095 221 PANTHER 40S RIBOSOMAL PROTEIN S10 26 219 IPR037447 -
Aev03g3095 221 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 26 219 - -
Aev03g3095 221 MobiDBLite consensus disorder prediction 154 170 - -
Aev03g3095 221 Gene3D - 43 146 IPR036388 -
Aev03g3095 221 MobiDBLite consensus disorder prediction 134 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3095 Aev-Chr3 29670591 29672837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3095 43 196 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 83.226 5.76e-75 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3095 K02947 K09422 gmx:100500445 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3095 03 29670591 29672837 Aev03g3095 03 29670591 29672837 ECH
Aev05g0993 05 6981771 6983267 Aev03g3095 03 29670591 29672837 PCT