Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3090 ATGAAGATGGGTGATGAAGAAGAGAACGAGAAATCGAGGGAGATGGGGGCAAACTCAGCAGCAGCAGCATTATCAGGTGGTGGTGGATTAATCTGCTACTCGGACAACACAGGAACTACGATTCAACCCCAACACCTGCTCCAAGGAGGAGCTGGGTTTGTGGCAGCAGCATCGCAATCAGAGATGTTCAGCCTCTCAAGTGGCATCCACATGATGACCAACAATCTTCACAGCACTACTAATAATCTCATGCTCGCTCCTCATTCTTCTTCGTCAGCGGGCCCGTGGCACCAAGACCACCACCACCACACAAGACTGATCGTAGATGATGAGCCTTGTAATTTCCGATGCGTGTTCCCCTGTGAAGGTAACGAGAGGCCAAGTCAAGGCCTTTCACTCTCTCTTAGCTCTACCAACCCTTCAACTATTGGCTTGCAATCTTTTGAGCTCAGACAAACCACCACCCACCAGCAAATGCTGCAACAAGATCAAGGGTATCAAGGGCATTCTTTCTCGCTCAGGAACTCCAAGTTCTTGCTGCCTGCTCAGGACCTTCTTAACGAGTTCTGTAGCCTAGGATGCAGGCAGCAGCAGCAGCAGCAGAGTGAAGTGGTGAAGAATCAGCACAAGAACAAGAAGTGGGAAGAAGATCAGGACAATAACGCTGAAAGCAGTGGTGGTTCCTCAAAGAAGCACCCTCTTAGCTCTCTTGAATTCCTCGAATTGCAGAAAAGAAAGACCAAACTGCTCGCCATGCTCGAAGAGGTGGAGAGAAGGTACAAGAACTACTGCAACCAGATGAGGGCGGTGGCGTCGTCGTTTGAGGCGGTGGCGGGGAAGGGGGCGGCGAGGGTGTACTCGGCATTGGCGTTGAAGGCGATGTCTCGGCACTTCAGGTGCTTGAAGGATGGGATAACGGATCAGATTGAGAGGACGAGGAAGGCGATGGGGGAGAGAGAGGAGTCGCCAGTGGCACCGGGCACGACGAGAGGGGAGACTCCGAGGCTGAGAGTGATAGACCAGGCCCTGAGGCAGCAGAGGGCCTTTCAGCAAATGACCATCATGGAAACCCATCCTTGGAGACCCCAGCGTGGCCTTCCTGAACGTTCCGTTTCCCTTCTCAGGGCCTGGCTCTTCGAGCATTTTCTTCACCCGTACCCAAGCGATGTTGATAAACATATTTTAGCACGCCAAACAGGCCTCTCTAGAAGCCAGGTTTCAAATTGGTTTATTAACGCAAGGGTGAGGCTATGGAAGCCAATGGTGGAGGAGATGTACTTGGAAGAAGCCAAGGAGAATGAAACCAACATTATGGCATCCTCTGAAGGAGACACCAACACCGACCTACCTCCAGATTCATCAAGGTCACACGATCAGAAGCCATCTCAAGCTCGCCTCCTTAGAATTGATTCAGAGTGTGTGTCCTCCATAATCAACAACTCCGACCACCAAGACGACCCAACAAACAAGACCACAAAAACAATCCACAACATGAATCCATCATCACATGATGATCAACAATTCTTAGGGCGAGTCGCTGCGGACGCCTTTGGAACGGTTGAGATTGATTTCTCATCCTATGATCATCACCACCACTCAACTGCCGGCATGGTCTCTTACAATAATGGTGGTGGTGCGGTGTCATTGACACTAGGGTTACAACAACACGCCGGTGGAAATGCGGTGAGCTTAGCATTCCCTCCGGCGGTGGCGACTCAGGGATCAATGTTCTACTCAAGGGAGCAGATAGTAGAAGAGTGTCAGCCGGTGGTTCATCAGTACTCTCTTTTGGACGGTGAAGGACAAAGCATGCCCTACAGGAATTTGATGGGGACACAGTTGCTTCATGACCTGGCAAATTAA 1863 0.5094 MKMGDEEENEKSREMGANSAAAALSGGGGLICYSDNTGTTIQPQHLLQGGAGFVAAASQSEMFSLSSGIHMMTNNLHSTTNNLMLAPHSSSSAGPWHQDHHHHTRLIVDDEPCNFRCVFPCEGNERPSQGLSLSLSSTNPSTIGLQSFELRQTTTHQQMLQQDQGYQGHSFSLRNSKFLLPAQDLLNEFCSLGCRQQQQQQSEVVKNQHKNKKWEEDQDNNAESSGGSSKKHPLSSLEFLELQKRKTKLLAMLEEVERRYKNYCNQMRAVASSFEAVAGKGAARVYSALALKAMSRHFRCLKDGITDQIERTRKAMGEREESPVAPGTTRGETPRLRVIDQALRQQRAFQQMTIMETHPWRPQRGLPERSVSLLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEAKENETNIMASSEGDTNTDLPPDSSRSHDQKPSQARLLRIDSECVSSIINNSDHQDDPTNKTTKTIHNMNPSSHDDQQFLGRVAADAFGTVEIDFSSYDHHHHSTAGMVSYNNGGGAVSLTLGLQQHAGGNAVSLAFPPAVATQGSMFYSREQIVEECQPVVHQYSLLDGEGQSMPYRNLMGTQLLHDLAN* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3090 620 MobiDBLite consensus disorder prediction 434 450 - -
Aev03g3090 620 MobiDBLite consensus disorder prediction 206 220 - -
Aev03g3090 620 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 51 568 - -
Aev03g3090 620 SMART prehox3 167 307 IPR006563 -
Aev03g3090 620 MobiDBLite consensus disorder prediction 478 505 - -
Aev03g3090 620 SMART HOX_1 360 424 IPR001356 GO:0003677
Aev03g3090 620 Coils Coil 239 266 - -
Aev03g3090 620 Pfam Homeobox KN domain 377 416 IPR008422 GO:0003677|GO:0006355
Aev03g3090 620 MobiDBLite consensus disorder prediction 201 235 - -
Aev03g3090 620 CDD homeodomain 360 421 IPR001356 GO:0003677
Aev03g3090 620 Pfam Associated with HOX 173 306 IPR006563 -
Aev03g3090 620 ProSiteProfiles 'Homeobox' domain profile. 357 420 IPR001356 GO:0003677
Aev03g3090 620 Gene3D - 363 425 - -
Aev03g3090 620 MobiDBLite consensus disorder prediction 434 464 - -
Aev03g3090 620 SUPERFAMILY Homeodomain-like 361 426 IPR009057 -
Aev03g3090 620 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 51 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3090 Aev-Chr3 29636711 29640299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3090 113 619 Homeobox Transcription Factor Family AT5G41410 48.201 9.87e-147 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aev03g3090 POX 7.5e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3090 - - qsu:112025693 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3090 03 29636711 29640299 Aev03g3090 03 29636711 29640299 ECH
Aev05g0988 05 6956613 6960229 Aev03g3090 03 29636711 29640299 PCT