Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3088 ATGGGGTTCCCAGTGGGTTACACAGAACTTCTCTTCCCAAAGCTCGTTCTCCACATCCTCTCCGTATTGGGCTTCATCAGAAAACTAATTTCCACCCTCTTCCGGTGCCTGGGCCTCCCCGATTTTATAGAGCCCGACATTGCCTGGCCCGACCCGAATACCCGGATACCCGAATTCCAGTCTGTGTCGGAGCTCCTGATCCGCGAAATCCTTCCGGTTGTGAAGTTCTCGGAGCTTGTGGACCCGCCGGAAAGCTGCGCCGTGTGTCTCAGCGAGTTCGAGATCGACGACGAGATCCGACGGCTCACGAATTGCCCACACATATTCCACAGAGGCTGTCTGGACCGTTGGATGGGGTACGATCAGAGGACGTGTCCACTGTGCAGAACACCGTTCATTCCTGAAGATTTGCAAGGCGCATTCAATGAGAGGCTTTGGGCTGCTTCTGGGATCCCTGAATTTCACCATCATTTTGTTGCTTCTTTCTAA 489 0.5358 MGFPVGYTELLFPKLVLHILSVLGFIRKLISTLFRCLGLPDFIEPDIAWPDPNTRIPEFQSVSELLIREILPVVKFSELVDPPESCAVCLSEFEIDDEIRRLTNCPHIFHRGCLDRWMGYDQRTCPLCRTPFIPEDLQGAFNERLWAASGIPEFHHHFVASF* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3088 162 PANTHER BRH1 RING FINGER PROTEIN 1 157 - -
Aev03g3088 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 141 IPR013083 -
Aev03g3088 162 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Aev03g3088 162 SUPERFAMILY RING/U-box 66 135 - -
Aev03g3088 162 SMART ring_2 86 128 IPR001841 -
Aev03g3088 162 Pfam Ring finger domain 85 129 IPR001841 -
Aev03g3088 162 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3088 Aev-Chr3 29613686 29614174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3088 1 150 C3H Transcription Factor Family AT1G63840 61.935 1.01e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3088 K16281 - zju:107429858 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3088 03 29613686 29614174 Aev03g3088 03 29613686 29614174 ECH
Aev05g0985 05 6926681 6927178 Aev03g3088 03 29613686 29614174 PCT