Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3086 ATGTCTTCCGGTCTGTATTCATTTGGTACTTCTTTGCATCATCACACACATTCAAGCTCAGACATGCTGTCCTCTGGCTCTGATGGAGGAGACCTTGCTTTTCTCTCTGACGCATTCCATTTCTTCAACAACAGTACTGACCATCTTGTTTCTCACCAGAACCAGAACCAGAACCAGAGCGTGTTATTCGATGAACCTGCTCTTCCTTCTTCGTCTTCCTCTGCTGATCCCTTTTCCACTTGTTTCTTCTCTTTCTCTCCTCCCAGCACACACTTGCAGAGCCTGAGCATTAATCCTCAGGGGAATTTGGAGAGCGAATTTGCGAGTTTCTCGGGTTTTGATGGTGCGTCTGAAGTAGTGAAGAGCGAGGAGTGCCAAATTGGTAGTGTTGAATTTGATTATGCATACAACAATAGCAGTAATAATCAGCAGTTTCTCCCTCACAGTTATAGTGGTGCTGAGAATAATGGAGGACAAATGAGGAGGGTTTGCAGCACTGGTGATTTGCAGAACATGAACGGGTCATTGTTGGAGGAAGGAAACTTCAAAGTGGGGCGTTACAGTGCGGAAGAAAGGAAAGAAAGGATTTCTAAATACAGAGCAAAGAGAAGCCAGAGGAATTTCAACAAAACCATTAAGTATGCATGCCGAAAAACACTAGCCGACAATCGACCACGCATACGTGGCAGATTCGCACGCAACGACGACACCTGCGACATTCCCAAGGCTCCATCTTCAATCCGAGATGAAGATGATGATGTCGATTTCTGGATTGAAGGGTTGCAATTGCATGAAGAGCAGGAGGAAGTAGCACTTAGTGGAGCGGAACACTATATAAACGGCTATGGTTATGGAGCTACTCAGTTAACTCAGTATTATCGTTTTTGA 888 0.4493 MSSGLYSFGTSLHHHTHSSSDMLSSGSDGGDLAFLSDAFHFFNNSTDHLVSHQNQNQNQSVLFDEPALPSSSSSADPFSTCFFSFSPPSTHLQSLSINPQGNLESEFASFSGFDGASEVVKSEECQIGSVEFDYAYNNSSNNQQFLPHSYSGAENNGGQMRRVCSTGDLQNMNGSLLEEGNFKVGRYSAEERKERISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDDTCDIPKAPSSIRDEDDDVDFWIEGLQLHEEQEEVALSGAEHYINGYGYGATQLTQYYRF* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3086 295 ProSiteProfiles CCT domain profile. 192 234 IPR010402 GO:0005515
Aev03g3086 295 Pfam CCT motif 192 234 IPR010402 GO:0005515
Aev03g3086 295 PANTHER CCT MOTIF FAMILY PROTEIN 157 274 - -
Aev03g3086 295 PANTHER CCT MOTIF FAMILY PROTEIN 28 155 - -
Aev03g3086 295 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 28 155 IPR045281 GO:0009909
Aev03g3086 295 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 157 274 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3086 Aev-Chr3 29597455 29598995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3086 178 237 C2C2-CO-like Transcription Factor Family AT5G24930 46.667 7.44e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev03g3086 CCT 7.3e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3086 - - adu:107479916 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3086 03 29597455 29598995 Aev03g3086 03 29597455 29598995 ECH
Aev05g0983 05 6917221 6918420 Aev03g3086 03 29597455 29598995 PCT