Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3070 ATGGAAGACGGAAAAGAACAAGTCGATTGCGCCTCCTCACAGAATCCCCCAAATCAAGAAGCAGAAACCCCAATCTCAGAATCAGAATCAGAATCAGAATCCTCCTCCGGATTCAATCAGGGTGAAATTCTGAGAGCAATAGAAGTGGTGGAGCGAGACTCATTAGCCATCGCTCAGAGTTTCACTTCACTCTTCGCCTCCCTCCGATTGGCTCTCTCCCACGCTACAACCACCACACTCGATCATATACACTGCTTCTCCGACGCTTCCGGTCGCCTTCAGGAATCTGTGCTCGATGCAGCAACCAAGGGGAATCGCTATATAAATTCGTGTCTCAGATTGAATGAGGAGATGAAGAGCATCGATGGTCTTGCTTCCCAACTAAAAGAACATTGTGTAATGTTCAAACCAACAGGTGTGAAGAGGAACCAGGAAATGGTGGCAGAGAACATGAAGAAACAGCTTGCTTTGGCTGTGAGAAGCATCCAATGGAGCTATGCAATATTCTGGTCTAGTTCTGCTACACAACCTGGGGTGTTGAGCTGGGAGGAAGGATATTACAATGGAGACATAAAGACAAGGAAAACAAATCAAGCAGTGGAACATAATTCAGATCAAATAGGGCTTCAGAGGAGTGAACAGCTTAGAGAATTATACAAATCCCTCAAAACTGTGGAAGCCACTCCACAAACAAAAAGGCCTTCAGCTTCACTGTCTCCTGAAGACCTCACAGATACAGAATGGTACTATTTGGTTTGCATGTCCTTTGTATTCAACATTGGCCAAGGGTTACCAGGAAGATCTCTAGCAAATGGCCAACCAATTTGGCTCTGCAATGCCCATTCTGCTGATTGCAGAGTTTTTAGTCGCTTTCTGCTGGCTAAGAGTGCATCCATTCAGACAGTGGTGTGCTTTCCTTTTATGGATGGGGTCATTGAGCTAGGTACTACTGATATGGTATCGGAAGACCTCGGTCTCATTCAACGGATCCGGATTTCATACTTGAATACCTTGGATGACAATGCTACTGATAAGTCTGGAGCTGCATTGAACATAAGAAATGAGAGTGGTAATAATGCTTACAATGTTAAACCAACACCAGAAGTAGGATATGGAGTAATAATCAACACAAGCTCTCCTAATAGCAGTTCAAACGCGTTGCGAGCAAATCAGCCAGCAGACAGAAGAACATTGATGGTTGAAAGGATAAATGGTGGCACCTCTCAAATCATGGATGATGAATTGAGCAATGGTGTCCATAACTCAGTGAATTCTAGTGACTGTGTATCTCAGCCTCTTGCAAGTCCTGAGATGATTGCTTCACTTTCCAAGGGTGAAAATGCTAATGACCATCCTGCTAGAGGTCTTCAAAAGTGTAATAATAACTCAAAAATGACCTTAGTGGATCCTCGAAGCGACGATTGGCATTATCAGATGGTTCTTTCTACTCTGCTAAAAGGTTCAGACCAGCTAATCATAGGGATGCATTTTCAAAATTGTCATCAGGAATCAAGCTTTGTCAGGTGGAACAAGAATGAAGGGCCAATGAACTTCCAAAGGCCAAGAACCGGAACCGCGCAAAATTTATTGAAGAAGGTACTTTTGGAAGTTCCTAGGATGCACTTGGATGGTTTGCTAGAGTCTCAGGAAGAGAATGACTTCAAGGAGGGAACGAGACAAGAAGCCGAAGAAAACGGCATGAACCATGTTCTGTCAGAAAGAAGGAGAAGAGCAAAATTAAATGAAAGGTTCTTAACACTTAGATCAATGGTCCCTTCAATTACCAAGGATGACAAAGTTTCAATACTAGATGATGCAATAGAATACCTTAGGAAGCTTGAGAAGAGGGTAAGAGATTTGGAAGCTCACAAGGAACTAATAGATATAGAGGCTAGAACTAAAAGATCACCTCAAGATATGATGGAGAGGACTTCTGATAATTACTTTAACAGAACAGATAATGGCAAGAAATCATTGGCAAAAAAGAGGAAGGGATGTGAAATAGATGAAACAAGGACAGAGATTAATGATGTCAATGTCAGAATTGGTGAGAATGAAGTTGTGATTGAAATTAAGTGCCTTTCAAGAGAAGGAAAGTTCCTTAAAATTATGGAAGCAGTTAACAGTCTCAATTTAGAGTTTAATTCAGTTCAGTCGACAGAAGCTGAAGGGAATCTTTATCTCACCATAAAATCTAAGCTCACAGGACCCACTAATAATGTATCAGCAAAAAGGATCAAACAAGCACTACAAAATGCAGCTTCCAAATGTTGA 2274 0.4186 MEDGKEQVDCASSQNPPNQEAETPISESESESESSSGFNQGEILRAIEVVERDSLAIAQSFTSLFASLRLALSHATTTTLDHIHCFSDASGRLQESVLDAATKGNRYINSCLRLNEEMKSIDGLASQLKEHCVMFKPTGVKRNQEMVAENMKKQLALAVRSIQWSYAIFWSSSATQPGVLSWEEGYYNGDIKTRKTNQAVEHNSDQIGLQRSEQLRELYKSLKTVEATPQTKRPSASLSPEDLTDTEWYYLVCMSFVFNIGQGLPGRSLANGQPIWLCNAHSADCRVFSRFLLAKSASIQTVVCFPFMDGVIELGTTDMVSEDLGLIQRIRISYLNTLDDNATDKSGAALNIRNESGNNAYNVKPTPEVGYGVIINTSSPNSSSNALRANQPADRRTLMVERINGGTSQIMDDELSNGVHNSVNSSDCVSQPLASPEMIASLSKGENANDHPARGLQKCNNNSKMTLVDPRSDDWHYQMVLSTLLKGSDQLIIGMHFQNCHQESSFVRWNKNEGPMNFQRPRTGTAQNLLKKVLLEVPRMHLDGLLESQEENDFKEGTRQEAEENGMNHVLSERRRRAKLNERFLTLRSMVPSITKDDKVSILDDAIEYLRKLEKRVRDLEAHKELIDIEARTKRSPQDMMERTSDNYFNRTDNGKKSLAKKRKGCEIDETRTEINDVNVRIGENEVVIEIKCLSREGKFLKIMEAVNSLNLEFNSVQSTEAEGNLYLTIKSKLTGPTNNVSAKRIKQALQNAASKC* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3070 757 PANTHER TRANSCRIPTION FACTOR TT8 143 752 - -
Aev03g3070 757 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 151 331 IPR025610 -
Aev03g3070 757 Coils Coil 603 630 - -
Aev03g3070 757 Pfam Helix-loop-helix DNA-binding domain 568 614 IPR011598 GO:0046983
Aev03g3070 757 MobiDBLite consensus disorder prediction 1 38 - -
Aev03g3070 757 Pfam BLOC-1-related complex sub-unit 6 C-terminal helix 45 130 IPR046465 -
Aev03g3070 757 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 564 613 IPR011598 GO:0046983
Aev03g3070 757 Coils Coil 545 565 - -
Aev03g3070 757 Gene3D - 555 628 IPR036638 GO:0046983
Aev03g3070 757 PANTHER TRANSCRIPTION FACTOR EGL1 143 752 - -
Aev03g3070 757 MobiDBLite consensus disorder prediction 8 38 - -
Aev03g3070 757 SMART finulus 570 619 IPR011598 GO:0046983
Aev03g3070 757 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 567 627 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3070 Aev-Chr3 29493504 29500627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3070 142 757 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 46.412 9.56e-178 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev03g3070 bHLH-MYC_N 1.9e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3070 - - ahf:112732736 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3070 03 29493504 29500627 Aev03g3070 03 29493504 29500627 ECH