Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3063 ATGGATGGGAGAGAAGCTATGGCATTCTCTGGTGGATCAGCTTCATATTACCTGCATAGGGGAAGTGTTGGTGGTTCTGGCTCTGCAACACAGACAGGGGGGTTCCAAGGACCACCTGGGTTCAGAGCTTTGTCAAGCACTGGCATTCATCAACCTCATTCAAATAATGTAAGGGGTGGTTCTGTTGCTTCTGTTTCTTCATTTTCAGTGGAGGTTCAGTCACAGTCACAGTCACAGTCTCATCATGCCAATTTTAGCCATGGCATTAGCATTGGTCCCTCTTCTGGTTCTGGAGTGCCTTCTTCTTCTTCTACAGGTGAGCCTGTGAAGAAAAAAAGAGGGAGGCCCCGGAAGTATGGTCCTGATGGACCAGTTTCTTTGAGACTTTCTTCTCCAATGTCTGCCACGGCTAATTCTACCCCAGGTTCAACCACACCTTCCCAGAAAAGGGCTAGAGGGCGCCCACCTGGATCTGGAAGGAAGCAACAGCTTGCTACTCTAGGTGAATGGATGAACAGTTCTGCAGGGCAGGCTTTCTCACCTCATGTTGTCACCATTGGAGTTGGGGAGGACATTGTAGCAAAGCTATTCTCACTATCCCAACAGAGACCAAGGGCTCTCTGCATCTTGTCGGGCACTGGGACAGTTTCTTCAGTTACTTTGCGGCAGCCTGCTTCTAGCGATGCCAGTATAACTTTTGAGGGGCGATTCCAAATATTATGCTTATCTGGTTCTTACTTGGTTGCTGAAGATGGTGGACCCTCTAATAGAACAGGTGGCATAAGTGTTTCCCTTTCTAGCCCTGACGGTCATGTTCTTGGCGGCGGTGTTGCAGTCCTTATTGCTGGAACCCCAGTGCAGGTGGTAGTGTGCAGTTTCGTATATGATGGCTCTAAGACCAAGCCTAAGCAAGGGAGCTCTACCAGAGATGATAGTTCCGAGCCTCAGCACAGCGACAAGTTAGCTTCTCCAGACACTGCTCCACATAGTCAGAACTACTTCCCCGCCACGTCAAGCATTTGGCCTGGATCACGGCCACAGCCGGAACAAAAAAGCCTACACATACACACCGGCTTTGACTTGACCCGAGGGTGA 1095 0.4986 MDGREAMAFSGGSASYYLHRGSVGGSGSATQTGGFQGPPGFRALSSTGIHQPHSNNVRGGSVASVSSFSVEVQSQSQSQSHHANFSHGISIGPSSGSGVPSSSSTGEPVKKKRGRPRKYGPDGPVSLRLSSPMSATANSTPGSTTPSQKRARGRPPGSGRKQQLATLGEWMNSSAGQAFSPHVVTIGVGEDIVAKLFSLSQQRPRALCILSGTGTVSSVTLRQPASSDASITFEGRFQILCLSGSYLVAEDGGPSNRTGGISVSLSSPDGHVLGGGVAVLIAGTPVQVVVCSFVYDGSKTKPKQGSSTRDDSSEPQHSDKLASPDTAPHSQNYFPATSSIWPGSRPQPEQKSLHIHTGFDLTRG* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3063 364 MobiDBLite consensus disorder prediction 319 346 - -
Aev03g3063 364 ProSiteProfiles PPC domain profile profile. 176 316 IPR005175 -
Aev03g3063 364 MobiDBLite consensus disorder prediction 303 318 - -
Aev03g3063 364 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 364 - -
Aev03g3063 364 MobiDBLite consensus disorder prediction 129 151 - -
Aev03g3063 364 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 364 IPR039605 GO:0003680
Aev03g3063 364 MobiDBLite consensus disorder prediction 20 162 - -
Aev03g3063 364 MobiDBLite consensus disorder prediction 47 107 - -
Aev03g3063 364 Pfam Plants and Prokaryotes Conserved (PCC) domain 181 294 IPR005175 -
Aev03g3063 364 SUPERFAMILY AF0104/ALDC/Ptd012-like 177 295 - -
Aev03g3063 364 MobiDBLite consensus disorder prediction 299 364 - -
Aev03g3063 364 Gene3D - 181 308 - -
Aev03g3063 364 CDD DUF296 181 293 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3063 Aev-Chr3 29440325 29448817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3063 1 364 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 47.015 3.51e-96 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3063 - - gmx:100798706 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3063 03 29440325 29448817 Aev03g3063 03 29440325 29448817 ECH