Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3054 ATGAAGTCATGTACTTCATTGTTGTTTCTTGGTTTGATTTCCACGCTCTCTTTTGTGGCTTCTGCTAATGTGGCCTCAAATGAAGTTTGGGCACTTACAAGCTTCAGAGAAGCTGTGTCTGATGATCCACACCTAGTTTTGTCAGATTGGAATACACTGGTTTCAGATCCTTGTGATTGGAATGGGGTTTCATGCAATGGGCCTAGAGATCATGTCATCAAGCTAAACATCTCAGGGTCATCATTAAGGGGATTTCTTGCACCAGCATTGGGGCAAATCACCTACTTGCAAGAACTAATCTTGCATGGAAACAATCTTATTGGAGTAATACCGAAAGAATTGGGCATGTTGAAATCTCTCCATGTGTTGGATTTGGGAATGAATCAGTTAACAGGACCAATTCCTCCGGAGATTGGGAATTTGATCCAAGCTGTGAAAATAAACCTGCAGTCCAACGGGTTGATTGGTAGGCTACCCCCAGAGCTTGGAAATTTGAAGAACCTCCAAGAACTTCGGCTGGATAGGAATAAGCTTCAAGGTCCTGTTCCTGCTGGTGGAAGTTTTGATTCAAATATGCATGAGATGTATGCCTCAAATGTGAATTTAACTGGCTTCTGTCGTTCGTCTCAGTTAAAAGTTGTAGATCTTTCATATAATTTTTTTGTTGGTGGCATACCCAAATGCTTGGGATATCTTCCAAGATCAAGCTTTCAAGGGAATTGCCTACAGATTAAAGACATAAAGCAGCGGACTTCTGGACAATGTGCCGGTGCTTCACCTGCCCAGAGCCATCCAATAGTGAACTTAAAGCATCGACATGCTGAACATGCGTCCAAGCATCAAGAAGCATCAAAGCCTACCTGGCTTTTGGCTCTAGAAATAGTGACGGGAACCATGGTTGGTTCTCTCTTTCTGATTGCCATTTTCACTGCATACCAGAGGTTTAACAGCAAATCATCTATCATTATTCCTTGGAAAAAATCTTCAAGCGAGAAAGAACACATGACTGTATATATAGAATCCGAAATGTTGAAGGATGTGATGAGGTATAGCAGACAAGACCTTGAACTGGCCTGTGAAGACTTCAGCAACATAATTGGTTCCTCACCGGATAGTGTGGTCTACAAGGGTACAATGAAAGGTGGCCCTGAGATTGCTGTAATTTCTCTCTGCATCAAGGAAGAGCATTGGACGGGTTACCTTGAGCTCTATTTCCAGAGAGAGGTGGCAGATTTGGCGAGGTTGAACCATGAGAATACAGGAAAACTACTAGGCTATTGCAGAGAGAGCAATCCTTTTACCAGGATGCTGGTTTTTGAGTATGCTTCAAATGGGACACTTTATGACCACCTACATTGTTATGGAGATGGGTGCCAGTTGTCTTGGACACGTCGCATGAAAATTATCATAGGCATTGCTCGTGGACTCAAGTATTTGCACACCGAAATCGAGCCGCCATTCACTATCTCTGAGCTGAATTCCAATGCTGTCTACCTCACAGATGATTTTTCCCCTAAGCTGGTTGATTTCGAGAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCTGTTGGCAGCCAAGGGTCTGTGTGTGTTCTTTCAAATTCCTTGGAGGCGCGCCATCTAGATACCAAAGGAAATGTGTATGCTTTTGCAGTGCTTCTACTAGAGATAATCAGTGGGAGACCTCCATACTGCAAGGACAAAGGATACTTGGTGGATTGGGCTAGGGAGTATGTTGAAATGCCAGAAGTAATGTCATATGTGGTGGATCCAGAGCTGAAACATTTCAGATATGAGGACCTCAAAGTTATCTGTGAAGTAATAACACTGTGCATTAATGATGACCCCACTGTCCGTCCATCAATGCAGGAATTATGTGAAATGCTGGACACCGCAATTGACACATCAGTTACCGTGGATCTCAAGGCTGCTTCTTTGGCTTGGGCTGAACTTGCACTTTCATCATAA 1980 0.4308 MKSCTSLLFLGLISTLSFVASANVASNEVWALTSFREAVSDDPHLVLSDWNTLVSDPCDWNGVSCNGPRDHVIKLNISGSSLRGFLAPALGQITYLQELILHGNNLIGVIPKELGMLKSLHVLDLGMNQLTGPIPPEIGNLIQAVKINLQSNGLIGRLPPELGNLKNLQELRLDRNKLQGPVPAGGSFDSNMHEMYASNVNLTGFCRSSQLKVVDLSYNFFVGGIPKCLGYLPRSSFQGNCLQIKDIKQRTSGQCAGASPAQSHPIVNLKHRHAEHASKHQEASKPTWLLALEIVTGTMVGSLFLIAIFTAYQRFNSKSSIIIPWKKSSSEKEHMTVYIESEMLKDVMRYSRQDLELACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRESNPFTRMLVFEYASNGTLYDHLHCYGDGCQLSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSNAVYLTDDFSPKLVDFESWKTILERSEKNSGSVGSQGSVCVLSNSLEARHLDTKGNVYAFAVLLLEIISGRPPYCKDKGYLVDWAREYVEMPEVMSYVVDPELKHFRYEDLKVICEVITLCINDDPTVRPSMQELCEMLDTAIDTSVTVDLKAASLAWAELALSS* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3054 659 Gene3D Ribonuclease Inhibitor 25 271 IPR032675 -
Aev03g3054 659 SUPERFAMILY L domain-like 27 233 - -
Aev03g3054 659 SUPERFAMILY Protein kinase-like (PK-like) 337 633 IPR011009 -
Aev03g3054 659 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Aev03g3054 659 Gene3D Transferase(Phosphotransferase) domain 1 442 649 - -
Aev03g3054 659 Pfam Protein tyrosine and serine/threonine kinase 364 633 IPR001245 GO:0004672|GO:0006468
Aev03g3054 659 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 659 - -
Aev03g3054 659 ProSiteProfiles Protein kinase domain profile. 360 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g3054 659 Gene3D Phosphorylase Kinase; domain 1 323 441 - -
Aev03g3054 659 PANTHER PROTEIN MALE DISCOVERER 2 6 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3054 Aev-Chr3 29406459 29410152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3054 3 633 Receptor kinase-like Gene Family AT1G25320 27.557 6.70e-55 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aev03g3054 PK_Tyr_Ser-Thr 6.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3054 - - gmx:100781978 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3054 03 29406459 29410152 Aev03g3054 03 29406459 29410152 ECH
Aev05g0965 05 6807802 6811498 Aev03g3054 03 29406459 29410152 PCT