Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3047 ATGTGGCGGTCGGCGGTTTCAGAACGGCGAAGAACATTCTCGAAGCTTCTGTGCTCCTTCACGCTCTCCCGAAGCATGGGCGGCGGCCCCCGCACCTTCCCCGGCGGCGTGAACAAGTGGCAGTGGAAGCGCATGCACGAGAAGCGCGCCAGAGACAAAGAGAAGAGACTCCTCGATCAAGAGAAGCAGCTCTACCAAGCTCGCATTCGCTCCCACATCCGCTCTCAGCTCGCACCCGACGACTCCGTAGCCGCCTCCGTCACCCACGGTCCTATGTCCCCCAATGACCACATCAAAGCCCTCGCGAACCGTTTCATGAAGGAAGGTGCTGAAGATCTCTGGAACGACGACGACGGTCCAATAACGCCTCCGAATCCGAATCCGACAACGACTCCCACGCGCTTCAATGGCCCGTTGAGCACGCGCCGGGGATCAATTTCGTCGCCGGTGGATTTGCGGAATCTGATATCTGAAGCTCCGAACCCTAACTCGAGGAATTCGGGTGGTGGGAATTTCGCGCAGAGTAGGGGTTACCGTTCTGTTTCGGAGGTGAATTCGGGGAAGAAGGTAGATGGTGGGTTGAGTAGTAAGAGATTGATGCCTAATGGGAGGAGGAGATTCTGGAGGAATGATAATGATAGTGATAGTGATAGTGAGAGTGATGAAGATGAAGATGATGATGATGATTCGAGAGTTGGTTGGGATGTGAGGAAGAGGGGTAGCAGTGCTTCTTTGGGAAAATATGATGTGAAGAGAGAGAGGAGGGTGCTGCCTAAGACGTATGATGAAGAGGATGATTTTGCGGAGCAGGTTGAGTTGATTAAGTGTGAGCTTAGCAAGAAGAAGATGGCTCAGAATGAGGAGAAGGGGGAGCAAGAAACCATCCTAACTCAATCAAGATTTGATGAGTGTGGTATATCGCCTATGACAGTGAAGGCACTTTCTTCGGCTGGTTATATCCACATGACCCGGGTACAAGAGGCTAGCCTTCCTATTTGCCTTGAGGGTAAGGATGCTCTGGTCAAAGCTAAAACTGGCACCGGAAAAAGTGCAGCATTTTTGCTTCCTGCTATTGAAACAGTTCTGAAAGCTATGAGTAGCTATGCGTCTCAACGTGTGCCTCCAATACTTGTTCTTATTCTCTGCCCTACCAGAGAACTCGCCAGTCAAATTGCTGCTGAAGCAAAGGCTTTGCTAAAATATCACGATGGCATTGGTGTACAAACTCTAGTAGGAGGTGTACGATTCAAACTTGACCAGAAACGCCTTGAATCAGATCCATGCCAGATACTCGTTGCTACTCCTGGCAGGTTGCTAGATCATGTTGAGAACAAGTCTGGAATATCTGTGCGATTAATGAGCTTGCAGATGCTTGTACTTGATGAAGCTGATCATTTACTGGACCTGGGGTTTCGAAAGGATGTAGAAAAAATTGTTGATTGTTTGCCCCGTCAAAGGCAGTCATTGCTGTTTTCTGCAACCATGCCAAAGGAGGTCCGTCGTATGTCTCAGCTTGTTTTGAAAAGGGATCATACTTACGTTGATACAATTGGTGTGGGTTGTGTGGAAACTCCCCTGAAGGTCAAGCAATCTTTTCTAATTGCTCCACATGAATCACATTTTCAGATAGTGCACCATATTTTGAAGGAACATGTAATGCAAACTCCTGATTATAAGGTTATTGTTTTCTGTGTAACTGGGATGGTAACATCACTTATGTATCAACTTCTCCGCGAAATGAAAATGAAAGTTCGGGAGATACATTCACGAAAACCTCAGCTCTATCGAACTCGCATATCAGATGAGTTCAGGGAATCCAAACAACTAATTCTTGTCTCATCTGATGTTTCATCCCGTGGAATAAATTACCCTGACGTAACATTAGTCATACAGGTCGGAATTCCTCCAGATCGTGAACAGTATATACATCGTCTTGGAAGAACAGGACGGGAAGGCAAAGAAGGGGAAGGCATATTGTTGATTGCCCCATGGGAAGAGTATTTTTTAGATGAAATCAAGGATCTTCCTCTTGAGAAATTCCCTTTTCCGGACATAGATCCACAGGCAAAGCTCAAGCTTGAACATTGCATGGCAAAGATCGATAGTGATGTCAAAGAAGCAGCATATCATGCTTGGCTTGGTTATTATAACTCGATTAGGGAAATTGGGAGGGAAAAGTCCACTATTGCTGAGCTTGCAAACCGGTTTTCTGAATCAATTGGTCTGCAGAAGCCTCCTGCTCTATTCCGAAAAACTGCACTTAAAATGGGTTTGAAAGACATTCCTGACATGGCAGTCAAATATTCAAGGCTCTCATTTATGATCATAATGATGGTGCTGATGATAAGCCAGCTCTCAAGTTGCTGCATAGCCAGGAGATGGAAGGGTACAGAAATCAAGCAAACAGAAAATAGCATCTCTTTTCGGCAGTTCACATGGCATTTCCATGCAAGGACACAAGAAGAGGAACCTAGCAAAGATGAGATCCACCCTATTTATGGAGTTTCTCTAAGAGATGTTCCTGGGGGTCCAAACCCACTTCATAACTGA 2550 0.4639 MWRSAVSERRRTFSKLLCSFTLSRSMGGGPRTFPGGVNKWQWKRMHEKRARDKEKRLLDQEKQLYQARIRSHIRSQLAPDDSVAASVTHGPMSPNDHIKALANRFMKEGAEDLWNDDDGPITPPNPNPTTTPTRFNGPLSTRRGSISSPVDLRNLISEAPNPNSRNSGGGNFAQSRGYRSVSEVNSGKKVDGGLSSKRLMPNGRRRFWRNDNDSDSDSESDEDEDDDDDSRVGWDVRKRGSSASLGKYDVKRERRVLPKTYDEEDDFAEQVELIKCELSKKKMAQNEEKGEQETILTQSRFDECGISPMTVKALSSAGYIHMTRVQEASLPICLEGKDALVKAKTGTGKSAAFLLPAIETVLKAMSSYASQRVPPILVLILCPTRELASQIAAEAKALLKYHDGIGVQTLVGGVRFKLDQKRLESDPCQILVATPGRLLDHVENKSGISVRLMSLQMLVLDEADHLLDLGFRKDVEKIVDCLPRQRQSLLFSATMPKEVRRMSQLVLKRDHTYVDTIGVGCVETPLKVKQSFLIAPHESHFQIVHHILKEHVMQTPDYKVIVFCVTGMVTSLMYQLLREMKMKVREIHSRKPQLYRTRISDEFRESKQLILVSSDVSSRGINYPDVTLVIQVGIPPDREQYIHRLGRTGREGKEGEGILLIAPWEEYFLDEIKDLPLEKFPFPDIDPQAKLKLEHCMAKIDSDVKEAAYHAWLGYYNSIREIGREKSTIAELANRFSESIGLQKPPALFRKTALKMGLKDIPDMAVKYSRLSFMIIMMVLMISQLSSCCIARRWKGTEIKQTENSISFRQFTWHFHARTQEEEPSKDEIHPIYGVSLRDVPGGPNPLHN* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3047 849 MobiDBLite consensus disorder prediction 215 230 - -
Aev03g3047 849 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 547 694 IPR001650 -
Aev03g3047 849 Gene3D - 276 515 IPR027417 -
Aev03g3047 849 Pfam Helicase conserved C-terminal domain 547 651 IPR001650 -
Aev03g3047 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 669 IPR027417 -
Aev03g3047 849 SMART helicmild6 571 652 IPR001650 -
Aev03g3047 849 MobiDBLite consensus disorder prediction 111 235 - -
Aev03g3047 849 Pfam DEAD/DEAH box helicase 323 501 IPR011545 GO:0003676|GO:0005524
Aev03g3047 849 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 33-RELATED 29 766 - -
Aev03g3047 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 490 IPR027417 -
Aev03g3047 849 Coils Coil 43 63 - -
Aev03g3047 849 PANTHER RNA HELICASE 29 766 - -
Aev03g3047 849 SMART ultradead3 318 531 IPR014001 -
Aev03g3047 849 CDD DEADc_MSS116 306 515 - -
Aev03g3047 849 MobiDBLite consensus disorder prediction 132 182 - -
Aev03g3047 849 CDD SF2_C_DEAD 528 661 - -
Aev03g3047 849 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 330 513 IPR014001 -
Aev03g3047 849 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 299 327 IPR014014 GO:0003724
Aev03g3047 849 Gene3D - 523 753 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3047 Aev-Chr3 29354326 29361042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3047 299 677 Eukaryotic Initiation Factors Gene Family AT3G19760 27.778 2.53e-43 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3047 - - lang:109349967 1143.26