Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev03g3047 | ATGTGGCGGTCGGCGGTTTCAGAACGGCGAAGAACATTCTCGAAGCTTCTGTGCTCCTTCACGCTCTCCCGAAGCATGGGCGGCGGCCCCCGCACCTTCCCCGGCGGCGTGAACAAGTGGCAGTGGAAGCGCATGCACGAGAAGCGCGCCAGAGACAAAGAGAAGAGACTCCTCGATCAAGAGAAGCAGCTCTACCAAGCTCGCATTCGCTCCCACATCCGCTCTCAGCTCGCACCCGACGACTCCGTAGCCGCCTCCGTCACCCACGGTCCTATGTCCCCCAATGACCACATCAAAGCCCTCGCGAACCGTTTCATGAAGGAAGGTGCTGAAGATCTCTGGAACGACGACGACGGTCCAATAACGCCTCCGAATCCGAATCCGACAACGACTCCCACGCGCTTCAATGGCCCGTTGAGCACGCGCCGGGGATCAATTTCGTCGCCGGTGGATTTGCGGAATCTGATATCTGAAGCTCCGAACCCTAACTCGAGGAATTCGGGTGGTGGGAATTTCGCGCAGAGTAGGGGTTACCGTTCTGTTTCGGAGGTGAATTCGGGGAAGAAGGTAGATGGTGGGTTGAGTAGTAAGAGATTGATGCCTAATGGGAGGAGGAGATTCTGGAGGAATGATAATGATAGTGATAGTGATAGTGAGAGTGATGAAGATGAAGATGATGATGATGATTCGAGAGTTGGTTGGGATGTGAGGAAGAGGGGTAGCAGTGCTTCTTTGGGAAAATATGATGTGAAGAGAGAGAGGAGGGTGCTGCCTAAGACGTATGATGAAGAGGATGATTTTGCGGAGCAGGTTGAGTTGATTAAGTGTGAGCTTAGCAAGAAGAAGATGGCTCAGAATGAGGAGAAGGGGGAGCAAGAAACCATCCTAACTCAATCAAGATTTGATGAGTGTGGTATATCGCCTATGACAGTGAAGGCACTTTCTTCGGCTGGTTATATCCACATGACCCGGGTACAAGAGGCTAGCCTTCCTATTTGCCTTGAGGGTAAGGATGCTCTGGTCAAAGCTAAAACTGGCACCGGAAAAAGTGCAGCATTTTTGCTTCCTGCTATTGAAACAGTTCTGAAAGCTATGAGTAGCTATGCGTCTCAACGTGTGCCTCCAATACTTGTTCTTATTCTCTGCCCTACCAGAGAACTCGCCAGTCAAATTGCTGCTGAAGCAAAGGCTTTGCTAAAATATCACGATGGCATTGGTGTACAAACTCTAGTAGGAGGTGTACGATTCAAACTTGACCAGAAACGCCTTGAATCAGATCCATGCCAGATACTCGTTGCTACTCCTGGCAGGTTGCTAGATCATGTTGAGAACAAGTCTGGAATATCTGTGCGATTAATGAGCTTGCAGATGCTTGTACTTGATGAAGCTGATCATTTACTGGACCTGGGGTTTCGAAAGGATGTAGAAAAAATTGTTGATTGTTTGCCCCGTCAAAGGCAGTCATTGCTGTTTTCTGCAACCATGCCAAAGGAGGTCCGTCGTATGTCTCAGCTTGTTTTGAAAAGGGATCATACTTACGTTGATACAATTGGTGTGGGTTGTGTGGAAACTCCCCTGAAGGTCAAGCAATCTTTTCTAATTGCTCCACATGAATCACATTTTCAGATAGTGCACCATATTTTGAAGGAACATGTAATGCAAACTCCTGATTATAAGGTTATTGTTTTCTGTGTAACTGGGATGGTAACATCACTTATGTATCAACTTCTCCGCGAAATGAAAATGAAAGTTCGGGAGATACATTCACGAAAACCTCAGCTCTATCGAACTCGCATATCAGATGAGTTCAGGGAATCCAAACAACTAATTCTTGTCTCATCTGATGTTTCATCCCGTGGAATAAATTACCCTGACGTAACATTAGTCATACAGGTCGGAATTCCTCCAGATCGTGAACAGTATATACATCGTCTTGGAAGAACAGGACGGGAAGGCAAAGAAGGGGAAGGCATATTGTTGATTGCCCCATGGGAAGAGTATTTTTTAGATGAAATCAAGGATCTTCCTCTTGAGAAATTCCCTTTTCCGGACATAGATCCACAGGCAAAGCTCAAGCTTGAACATTGCATGGCAAAGATCGATAGTGATGTCAAAGAAGCAGCATATCATGCTTGGCTTGGTTATTATAACTCGATTAGGGAAATTGGGAGGGAAAAGTCCACTATTGCTGAGCTTGCAAACCGGTTTTCTGAATCAATTGGTCTGCAGAAGCCTCCTGCTCTATTCCGAAAAACTGCACTTAAAATGGGTTTGAAAGACATTCCTGACATGGCAGTCAAATATTCAAGGCTCTCATTTATGATCATAATGATGGTGCTGATGATAAGCCAGCTCTCAAGTTGCTGCATAGCCAGGAGATGGAAGGGTACAGAAATCAAGCAAACAGAAAATAGCATCTCTTTTCGGCAGTTCACATGGCATTTCCATGCAAGGACACAAGAAGAGGAACCTAGCAAAGATGAGATCCACCCTATTTATGGAGTTTCTCTAAGAGATGTTCCTGGGGGTCCAAACCCACTTCATAACTGA | 2550 | 0.4639 | MWRSAVSERRRTFSKLLCSFTLSRSMGGGPRTFPGGVNKWQWKRMHEKRARDKEKRLLDQEKQLYQARIRSHIRSQLAPDDSVAASVTHGPMSPNDHIKALANRFMKEGAEDLWNDDDGPITPPNPNPTTTPTRFNGPLSTRRGSISSPVDLRNLISEAPNPNSRNSGGGNFAQSRGYRSVSEVNSGKKVDGGLSSKRLMPNGRRRFWRNDNDSDSDSESDEDEDDDDDSRVGWDVRKRGSSASLGKYDVKRERRVLPKTYDEEDDFAEQVELIKCELSKKKMAQNEEKGEQETILTQSRFDECGISPMTVKALSSAGYIHMTRVQEASLPICLEGKDALVKAKTGTGKSAAFLLPAIETVLKAMSSYASQRVPPILVLILCPTRELASQIAAEAKALLKYHDGIGVQTLVGGVRFKLDQKRLESDPCQILVATPGRLLDHVENKSGISVRLMSLQMLVLDEADHLLDLGFRKDVEKIVDCLPRQRQSLLFSATMPKEVRRMSQLVLKRDHTYVDTIGVGCVETPLKVKQSFLIAPHESHFQIVHHILKEHVMQTPDYKVIVFCVTGMVTSLMYQLLREMKMKVREIHSRKPQLYRTRISDEFRESKQLILVSSDVSSRGINYPDVTLVIQVGIPPDREQYIHRLGRTGREGKEGEGILLIAPWEEYFLDEIKDLPLEKFPFPDIDPQAKLKLEHCMAKIDSDVKEAAYHAWLGYYNSIREIGREKSTIAELANRFSESIGLQKPPALFRKTALKMGLKDIPDMAVKYSRLSFMIIMMVLMISQLSSCCIARRWKGTEIKQTENSISFRQFTWHFHARTQEEEPSKDEIHPIYGVSLRDVPGGPNPLHN* | 850 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev03g3047 | 849 | MobiDBLite | consensus disorder prediction | 215 | 230 | - | - | |
Aev03g3047 | 849 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 547 | 694 | IPR001650 | - | |
Aev03g3047 | 849 | Gene3D | - | 276 | 515 | IPR027417 | - | |
Aev03g3047 | 849 | Pfam | Helicase conserved C-terminal domain | 547 | 651 | IPR001650 | - | |
Aev03g3047 | 849 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 376 | 669 | IPR027417 | - | |
Aev03g3047 | 849 | SMART | helicmild6 | 571 | 652 | IPR001650 | - | |
Aev03g3047 | 849 | MobiDBLite | consensus disorder prediction | 111 | 235 | - | - | |
Aev03g3047 | 849 | Pfam | DEAD/DEAH box helicase | 323 | 501 | IPR011545 | GO:0003676|GO:0005524 | |
Aev03g3047 | 849 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 33-RELATED | 29 | 766 | - | - | |
Aev03g3047 | 849 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 210 | 490 | IPR027417 | - | |
Aev03g3047 | 849 | Coils | Coil | 43 | 63 | - | - | |
Aev03g3047 | 849 | PANTHER | RNA HELICASE | 29 | 766 | - | - | |
Aev03g3047 | 849 | SMART | ultradead3 | 318 | 531 | IPR014001 | - | |
Aev03g3047 | 849 | CDD | DEADc_MSS116 | 306 | 515 | - | - | |
Aev03g3047 | 849 | MobiDBLite | consensus disorder prediction | 132 | 182 | - | - | |
Aev03g3047 | 849 | CDD | SF2_C_DEAD | 528 | 661 | - | - | |
Aev03g3047 | 849 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 330 | 513 | IPR014001 | - | |
Aev03g3047 | 849 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 299 | 327 | IPR014014 | GO:0003724 | |
Aev03g3047 | 849 | Gene3D | - | 523 | 753 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev03g3047 | Aev-Chr3 | 29354326 | 29361042 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev03g3047 | 299 | 677 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 27.778 | 2.53e-43 | 160 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev03g3047 | - | - | lang:109349967 | 1143.26 |