Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3037 ATGGAGTGGAATTTGAAAGCACCCTCTTGGGATTTGAGTGATGTGGATCAGACAACCTTACCAAACATAGAAACAGTGGATGGTTCAAGCAGATTTGGTGTTTACAGAACAAAAGGGGAATTTTCTGTTGACTTGAAACTTGGCCATGTTGGGAATTCTGCCACAGAACCAGTGGTCACTAATAATAATAAGCCCAAAGATGGTGGTGGTGCTGGTGGAGTGTCCAAGATTGCAGGCTCGCCTTCGGGGTCATCGAAGCGAGCCCGAGCCATTAACAATGGGAACCAGACAGTGTCATGCCTTGTGGATGGTTGCAATTCAGATCTTAGCACTTGTAGAGACTATCATAGGCGCCATAAGGTCTGTGAACTCCATTCCAAGACTGCTCAGGTCACAATTGCTGGCCACAAGCAACGCTTCTGCCAACAGTGTAGCAGGTTCCATTCATTGGAGGAGTTTGATGAAGGGAAAAGAAGCTGCAGAAAACGCCTAGATGGGCACAACCGACGGAGGAGAAAGCCACAGCCAGAACCCATCACGAGATCTGGTAGTTTTTTGTCCAATTACCAAGGGACCCAGTTGCTACCCTTCACAAGTTCACATGTGTTCCCTTCGTCTGGTATGGTGAGTCCTGGTTGGAGTGGAGATGTTAGGCTCCAACAGCAGCAGCAGCATCAACAGATGCACATGGTTGAGAAACAAGACCTGTTTCTAGGATCCTCACCAACAAGCTACAACAGCAGCAAAGAAGGGAAGCAGCAACTAGCATTCTTGCAACAAGGTGACACCAACACACCGCATCATCATCATCATCTTCAAGCTTCTGTGTGCCACCACCAGAACAACACGCTCATGAGGAACAGCACTTTCACAGAAAGTGGTGGATTGAGGTGCAAGATGTTCTGTGATACTAGTACTAGCCTAACGAATTCCGTCCGCGATTCGTCTTCTTCTTGTGCTCTCTCTCTTCTGTCATCACCCCCACAGACACACAGCAACAGCAACAATAACAATAACAATAACAATGGATCATTGAACCATATGGTGCATCCTCTTCCTGCTCATCATCACTCCTCACTGATGCAACCATTGGGGCTCAGCCTGCATGATAGCAGCATGGAGGCAGTGGACACGGTTCTGGGAGGAAGTGGTGGTGGGAGTGACCATTGTTCCTCAATGTATAACATGGATTCTCATCATGGATCACAGGGGAATGATGCTCCTCAATTGTTCCCATTTCAATGGGAGTGA 1251 0.4764 MEWNLKAPSWDLSDVDQTTLPNIETVDGSSRFGVYRTKGEFSVDLKLGHVGNSATEPVVTNNNKPKDGGGAGGVSKIAGSPSGSSKRARAINNGNQTVSCLVDGCNSDLSTCRDYHRRHKVCELHSKTAQVTIAGHKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPITRSGSFLSNYQGTQLLPFTSSHVFPSSGMVSPGWSGDVRLQQQQQHQQMHMVEKQDLFLGSSPTSYNSSKEGKQQLAFLQQGDTNTPHHHHHLQASVCHHQNNTLMRNSTFTESGGLRCKMFCDTSTSLTNSVRDSSSSCALSLLSSPPQTHSNSNNNNNNNNGSLNHMVHPLPAHHHSSLMQPLGLSLHDSSMEAVDTVLGGSGGGSDHCSSMYNMDSHHGSQGNDAPQLFPFQWE* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3037 416 Gene3D - 91 161 IPR036893 GO:0003677|GO:0005634
Aev03g3037 416 ProSiteProfiles Zinc finger SBP-type profile. 97 174 IPR004333 GO:0003677
Aev03g3037 416 MobiDBLite consensus disorder prediction 164 185 - -
Aev03g3037 416 Pfam SBP domain 100 173 IPR004333 GO:0003677
Aev03g3037 416 MobiDBLite consensus disorder prediction 320 347 - -
Aev03g3037 416 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 5 416 IPR044817 GO:0003677
Aev03g3037 416 MobiDBLite consensus disorder prediction 56 90 - -
Aev03g3037 416 MobiDBLite consensus disorder prediction 320 358 - -
Aev03g3037 416 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1 5 416 - -
Aev03g3037 416 SUPERFAMILY SBT domain 98 179 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3037 Aev-Chr3 29304385 29306913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3037 1 416 SBP-box Gene Family AT5G50670 37.813 2.43e-72 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev03g3037 SBP 5.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3037 - - ahf:112790946 523.472