Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3017 ATGGAGAAGGTGAATTTTGTGAAAAATGGAGTGAGCAGATTGCCTCCGGGATTTCGGTTCCAGCCAACAGATGAAGAGATTGTGTTTCAGTACTTGAAATCGAAGGTCTTCTCTTGTCCCTTGCCTGCTTCTATCATTCCTGACATCAATAATGTCTCCAACTACGATCCTTGGGAGTTGCCAGGAAAGTGTGATGATGAGGAAGAGAGGTACTTCTTCAGCTGGAAGGAAACAAAATATCGGAATGGAAGTCGCATGAACCGAACAACCAAATCTGGGTATTGGAAAGCAACAGGCTCAGACAAGAGAATTGTTTCTTCATCGTCGTCGTGTGACGGCATTGTGGGGATCAGAAAAAGCCTCGTGTTTTATGAAGGCAAATCCCCACATGGCTCTAGAACCCATTGGGTCTTGCACGAATATCGCCTTGCCAATGCTTCCACCTCCCAGAACTGCGTAAACGAGATAGGAGATTGGGTTCTATGTCGGTTATTGGTGAAGAAAAGGAATAATACTAATCTAGAAACTGATGGTGGCGGCAGCAGCAGCAGCACTACTCATCATCGTCAAATGATGATGATGCATAGTAATAAGAATCCAAGATTGTTGGATTTTATGATGGCAAGTAGCGTTGTTAAGGAACATTCTTCTTCCACAAGTACATCATCCTCATCGTGTTCAAGTTCTAGTAATAACTTCATCGAAGTCTCTTCCTATGCATCGGATCGATCATGA 735 0.4354 MEKVNFVKNGVSRLPPGFRFQPTDEEIVFQYLKSKVFSCPLPASIIPDINNVSNYDPWELPGKCDDEEERYFFSWKETKYRNGSRMNRTTKSGYWKATGSDKRIVSSSSSCDGIVGIRKSLVFYEGKSPHGSRTHWVLHEYRLANASTSQNCVNEIGDWVLCRLLVKKRNNTNLETDGGGSSSSTTHHRQMMMMHSNKNPRLLDFMMASSVVKEHSSSTSTSSSSCSSSSNNFIEVSSYASDRS* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3017 244 ProSiteProfiles NAC domain profile. 14 167 IPR003441 GO:0003677|GO:0006355
Aev03g3017 244 Pfam No apical meristem (NAM) protein 15 143 IPR003441 GO:0003677|GO:0006355
Aev03g3017 244 SUPERFAMILY NAC domain 10 167 IPR036093 GO:0003677|GO:0006355
Aev03g3017 244 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 243 - -
Aev03g3017 244 Gene3D NAC domain 23 172 IPR036093 GO:0003677|GO:0006355
Aev03g3017 244 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 243 - -
Aev03g3017 244 MobiDBLite consensus disorder prediction 216 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3017 Aev-Chr3 29172363 29173317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3017 1 169 NAC Transcription Factor Family AT5G13180 60.947 1.20e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev03g3017 NAM 1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3017 - - gmx:100812015 295.434