Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3013 ATGGATGATGGCAGACATAAGATGGACTATTACAGAGGAGCACACTCCCTGTGGAATATGGAGCCCCAGCATCAAGTAAAAGAGCCGAATGCACTGGTTTTGAATAAAAAAATAAGGTCCATTATGGCTGAAAGACGGGTTGCCATTCTAGAACTTGAACTAGAGGCTGCTGTATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATTTAGCCCTCCGACAGAGAGATGAAGCACTTGCTCAGAGGGATAATGCTTTCATGGAACGGGATAATGCCCTTGCTGCCCTTCAAAATCGAAACAACGATGTCAGCATCCAATTAGGTGGTGGATTTCGGCGTGGATCAAAGCGGATGCGGCCACACGACGCTGCATATAGCCCAATGGATATGCCAAGAAGGGATGTCTCCCCTATGACTGTTATAGCTTCTGAAACTGTCAAAACTCGTCAAGCTAAGAAAACGAAGGAGGACAGTGTGATTAATTCTAAGCCATCAAAGCCATCTAACAAAGTAAAGAAACTGGGTGATGATTTAAATAGGCAGGCTTCTTCAGAAGGTATAAAGATAAAATCTGAATGGGATAGGCAGGATGTTGGTTTGAATTTGATTACATTCGACGAAACTATCATGCCAGCCCCAGTATGCACATGCACTGGAGTACCACGACAGTGCTACAAATGGGGGAATGGCGGATGGCAGTCGTCTTGTTGTACCACCACATTGTCAATGTATCCACTACCACAGCTTCCGAACAAGCGCCATTCGCGCATTGGAGGGCGAAAGATGAGTGGAAGTGTTTTTACAAGACTGCTAAGTAGGTTGGCATCAGAAGGCCATGATGTATGCATACCGTTGGATCTAAGGAACTACTGGGCCAGACATGGGACAAATCGCTACATTACTATCAAGTAG 912 0.4539 MDDGRHKMDYYRGAHSLWNMEPQHQVKEPNALVLNKKIRSIMAERRVAILELELEAAVSEKNEALAARDLALRQRDEALAQRDNAFMERDNALAALQNRNNDVSIQLGGGFRRGSKRMRPHDAAYSPMDMPRRDVSPMTVIASETVKTRQAKKTKEDSVINSKPSKPSNKVKKLGDDLNRQASSEGIKIKSEWDRQDVGLNLITFDETIMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHSRIGGRKMSGSVFTRLLSRLASEGHDVCIPLDLRNYWARHGTNRYITIK* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3013 303 MobiDBLite consensus disorder prediction 106 133 - -
Aev03g3013 303 Coils Coil 47 67 - -
Aev03g3013 303 Pfam GAGA binding protein-like family 1 303 IPR010409 -
Aev03g3013 303 PANTHER - 2 303 IPR010409 -
Aev03g3013 303 SMART GAGA_bind_2 1 303 IPR010409 -
Aev03g3013 303 PANTHER PROTEIN BASIC PENTACYSTEINE4 2 303 - -
Aev03g3013 303 MobiDBLite consensus disorder prediction 147 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3013 Aev-Chr3 29155020 29156022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3013 2 303 BBR or BPC Transcription factor family AT2G21240 57.096 3.67e-123 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Aev03g3013 GAGA_bind 6.4e-96 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3013 - - gmx:100813103 469.159