Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3001 ATGGCATCAGGAGAGGTCTTGATGAACAATAATGATGGTAGGAAGGGTGCAGAGGGTCAAAACGCTTCTTCTTCTTCTTCGTCTTCATCAGCCAAAGAGGCTGAAGTAGCGCTTTACAGGGAGCTATGGCACGCTTGTGCAGGTCCTCTCGTGACAGTGCCGAGAGAAGGAGACCGCGTGTTCTATTTCCCTCAAGGACATATTGAGCAGGTGGAGGCGTCGACGAATCAGGTAGCAGACCAGCATATGCCAGTTTACGATCTCCCTTCCAAGATCCTTTGTCGGGTCATCAACGTCATGCTCAAGGCGGAGCCAGATACAGATGAGGTGTTTGCTCAGGTGACCTTACTGCCGGAACAAAATCAAGATGAGAATGCTGTGGAGAAAGAGCCTCCGCCGGCCCCACCGCCTCGATTTCATGTTCATTCATTTTGTAAAACACTGACGGCCTCCGATACAAGCACTCATGGTGGGTTTTCGGTGCTGAGACGACATGCAGATGAGTGTCTTCCTCCTCTGGACATGTCAAAGCAGCCACCTACCCAAGAATTGGTGGCCAAGGATCTGCATGGGAATGAGTGGCGATTCAGGCATATCTTTCGCGGTCAACCACGTAGACACTTGTTACAAAGTGGTTGGAGTGTTTTTGTCAGCTCCAAGAGGCTGGTTGCTGGGGATGCATTTATATTTCTCAGAGGTGAGAATGGGGAACTCCGAGTTGGGGTCCGTCGTGCAATGAGACAGCAGGGCAATGTTCCATCCTCGGTTATCTCTAGCCACAGCATGCATCTTGGCGTGCTTGCAACTGCGTGGCATGCCATCTTGACTGGGACCATGTTCACAGTTTATTATAAACCTAGGACCAGTCCAGCTGAATTTATTGTTCCGTATGAACTGTACATGGAGTCTCTAAAAAATAATTATACCATAGGGATGCGTTTCAAGATGAGGTTTGAAGGTGAAGAGGCTCCTGAGCAAAGGTTTACTGGTACCATTGTTGGAATTGAAGACTCTGACTCTAAAAGATGGCCGGAATCCAAATGGAGGAATCTTAAGGTGAGATGGGATGAAACATCTAACATACCTCGTCCTGAGAGAGTTTCCCCTTGGAAAATAGAGCCCGCTCTTGCTCCTCCAGCTATAAATCCTCTTCCAATCCCCAGACCTAAAAGGCCTCGGCCTAATGCAGTTCCTTCATCCCCAGATTCTTCTGTTCTTACTCGAGAAGCATCATCTAAAGTAAGCATAGACCCTTTACCAGCAAGTGGATTTCCAAGGGTCTTGCAAGGTCAAGAATTATCGACCTTGAGAGGCAATTTTGCTGAAAGCAATGAGACAGATACTGCTGAAAAGCCTGTTGTGTGGCCACCGGCAGCAGATGATGAAAAGATTGACGTTTCTACTTCTAGAAGGTACGGGTCAGAGGGCTGGATGTCAATGGGGAGGCATGAGCTAACATACTCGGATCTTCTTTCTGGTTTTGGGGCCAATGTAGGTCCTTCTTCCCATCAAACCTTGGTTGATCAAACTGGATCTGTGGCTAACCCTGCTAGAAAACATTTATTGGACCATGATGGCAAAATTAGTGTGCTTGGTAGCAGTCCGTGGCCTGTAATGCCCTCTGGTCTATCACTCAACTTCTTGGATTCTAATACAAAAGGTTCTGTCCAAGGTGGTGATACAACTTACCAATTTCGAGGAAATTCAAGGTATAGTGCATTTGGTGAATACCCTGTACTTCACGGTCACAAAGTTGAGCATCCACATGGTAACTTCTTGATGCCGCCCCCACCCCCAACTCAATTTGAGAGTCCTCGATCAAGGGAACTGTTGCCCAAACCAGTATCAGCAAAAACTTCTGACATTACAAAACCAAAAGATGGTGACTGTAAACTATTTGGCATCTCACTTCTCAGTAGCCCAGTTGCACCAGAGACTCCTACATCACAAAGTAATGTTGAAAGGGAGACAGTAGGACACGTGCATACTAAATCCCACCAATATCGCACATCTGAAAATGACCAGAAATCTGAACATTTAAGGGGCTCAAAAGCAGCAGACTGTCCAGTTGCAGTTGATGACCATGAGAAGCTGTTAAAAACCTCTCAGCCGCATCTAAAAGATGTTCAACCAAAACTGCATAGTGGTTCTGCTAGAAGCTGCACTAAAGTTCATAAGATGGGGATTGCACTTGGTAGGTCGGTGGACCTTGCAAAGTTCAGTGAGTACGGTGGATTAATTTCCGAATTGGATCAGCTGTTTGAATTTGGAGGTGAACTAATGTCTACAAAAAAGGATTGGCTTATTGTGTACACCGATGATGAGGGTGACATGATGCTTGTTGGTGATGATCCATGGCAGGAGTTCTGTGCAATGGTACGCAAAATTTATATCTATCCCAAAGAGGAGATTCAGAAAATGAGTCCAGGCACCTTAAGTTCAAAAAATGAAGAGACTCAGTCGGCTAGCGAAGGTGCTGATGCACAGGAGATTAAATGTCAGCAGCATCAATCTGCTTCAACACATGATAATTCTTAG 2538 0.4614 MASGEVLMNNNDGRKGAEGQNASSSSSSSSAKEAEVALYRELWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQVADQHMPVYDLPSKILCRVINVMLKAEPDTDEVFAQVTLLPEQNQDENAVEKEPPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTMFTVYYKPRTSPAEFIVPYELYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPESKWRNLKVRWDETSNIPRPERVSPWKIEPALAPPAINPLPIPRPKRPRPNAVPSSPDSSVLTREASSKVSIDPLPASGFPRVLQGQELSTLRGNFAESNETDTAEKPVVWPPAADDEKIDVSTSRRYGSEGWMSMGRHELTYSDLLSGFGANVGPSSHQTLVDQTGSVANPARKHLLDHDGKISVLGSSPWPVMPSGLSLNFLDSNTKGSVQGGDTTYQFRGNSRYSAFGEYPVLHGHKVEHPHGNFLMPPPPPTQFESPRSRELLPKPVSAKTSDITKPKDGDCKLFGISLLSSPVAPETPTSQSNVERETVGHVHTKSHQYRTSENDQKSEHLRGSKAADCPVAVDDHEKLLKTSQPHLKDVQPKLHSGSARSCTKVHKMGIALGRSVDLAKFSEYGGLISELDQLFEFGGELMSTKKDWLIVYTDDEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGTLSSKNEETQSASEGADAQEIKCQQHQSASTHDNS* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3001 845 MobiDBLite consensus disorder prediction 657 684 - -
Aev03g3001 845 MobiDBLite consensus disorder prediction 14 29 - -
Aev03g3001 845 ProSiteProfiles B3 DNA-binding domain profile. 144 246 IPR003340 GO:0003677
Aev03g3001 845 MobiDBLite consensus disorder prediction 641 656 - -
Aev03g3001 845 PANTHER AUXIN RESPONSE FACTOR 2 23 826 - -
Aev03g3001 845 MobiDBLite consensus disorder prediction 378 417 - -
Aev03g3001 845 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 23 826 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev03g3001 845 SUPERFAMILY DNA-binding pseudobarrel domain 140 273 IPR015300 -
Aev03g3001 845 SMART B3_2 144 246 IPR003340 GO:0003677
Aev03g3001 845 ProSiteProfiles PB1 domain profile. 719 801 IPR000270 GO:0005515
Aev03g3001 845 CDD B3_DNA 142 244 IPR003340 GO:0003677
Aev03g3001 845 Gene3D - 307 377 - -
Aev03g3001 845 MobiDBLite consensus disorder prediction 807 845 - -
Aev03g3001 845 Gene3D - 715 808 - -
Aev03g3001 845 MobiDBLite consensus disorder prediction 641 684 - -
Aev03g3001 845 Pfam Auxin response factor 270 352 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev03g3001 845 MobiDBLite consensus disorder prediction 397 411 - -
Aev03g3001 845 SUPERFAMILY CAD & PB1 domains 723 796 - -
Aev03g3001 845 MobiDBLite consensus disorder prediction 378 396 - -
Aev03g3001 845 Pfam B3 DNA binding domain 144 245 IPR003340 GO:0003677
Aev03g3001 845 Gene3D - 141 246 IPR015300 -
Aev03g3001 845 MobiDBLite consensus disorder prediction 1 29 - -
Aev03g3001 845 Pfam AUX/IAA family 763 806 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3001 Aev-Chr3 29066931 29071130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3001 1 845 B3 DNA Binding Superfamily AT5G62000 63.212 0.0 1084
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev03g3001 AUX_IAA 1.7e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3001 - - gmx:100815956 1386.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3001 03 29066931 29071130 Aev08g2455 08 23424367 23428374 PCT