Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2999 ATGCTTTGGTTTCTGTTCCGGTGTGCTGTGCTTCATTATCGCTTGGTTTCAACTTCATCTTCTCCGGCGGTTCTCTTGCTTTCCGGTGCAGTAGTGCTTTCGTCATCTTCAAGATCGAGATCGGAAGGACTTGGAGAGGTATACGATGGGGACATTGCATTTGTCAGTGCCCTTGAAGATTTCGGAGGAGGGAATAATGATCCTCATTTTGTTGCTTTAGGAGGACCTGTTATGTCCAAATTTACTATCGCTTTGAGAGAAGTCGGTACATTCAAGGAGCTTCTTCGGTCACAGATAGAGCAGATTCTCAATGATCGGTTACTGCAAATTATGAATGTTGACATCCAAGAAGTCAAGGAAGCTCGTAAGCGTTTTGACAAAGCTTCCCCAGTATATGACCAGGCACGTGAAAAGTTTATGTCTCTGAGAAAAAGCACGAGGCCTGACATTGCCACTACTATGGAAGGGGAATTGCTGGATGCAAGGACCACATTTGAGGAAGCCCGTTTCAATCTGGTTGGTGCTCTTAATAATATTGAGGCCAAGAAGAGATTTGAGTTCTTAGAGGCTCTTACTGGAATTATGGATGCTCATCTTCGATACTTTCAACAGGGATATCAGCTATTACATCAGATGCAACCTTTCTTTAATGAGATTTTGGATTATGTGCAACAATCAAAAGAGAGTTACAATAAGGAGCAGATTTCTCTCTATAAAAGAATGGAAGTGTACAAAAAACAAGTTTATCAAGAAAGTAGGATGTCCTTGAATGGCCCTTATGGTTCTCCGAGCGGAGACTTTGCGCATCCTTTTTCTAGGATATCAAATGAAGTGGCTGATGTAGTAATGGAATCTGCTGCAAATGGAAAGGTTCAAATCATTCGACAAGGGTATCTTTCAAAACGATCCTCCAATTTAAGGGGCGACTGGAAAAGAAGGTATTTTGTTCTTGATAGTCGAGGAATGTTGTACTACTATCGCAAACCATGGAACGGACCACATAGCAGTAATCAACCATCTGCACAAAGGAATACTACCACTGAAAATGGTCCCGGGCTTCTGAGCCGATGGCTTTCTTCTCATTACCACGGGGGTGTTCATGATGAAAGAGCTGTAGCACGTCATACCGTAAACCTGTTGACATCAACAATCAAATTTGATGCTGATCAGACAGATTTAAGGTTCTGCTTCAGGATCATTTCACCATCAAAGAACTATACATTGCAGGCAGAAAATGCAATAGACCAGATGGATTGGATGGAAAAGATAAACGGAGTAATTGCCTCCTTGTTGAGTGTCCAGACACTGGGAATGTCGCCCTCAGCCGACTGCGAAAATGATGACGGTGACTCTGACGACAAGACTGATACATTAGAAAGTTCTACAAATACTGATGTGGCTGAGAAGTCTACACCCAAAAATTCCACCCCGAAAAGCCATTTGCGTGCATTTATGAGTTTGCAGTTGCAAAGATACAGTATGAGAACTGAAAGGCCAATTGATGTTCTTAGGAGGGTGAGTGGTAACAACAAATGTGCTGATTGTGCTAAACCCGAACCTGATTGGGCATCTTTAAACCTTGGCATCCTTGTATGCATTGAATGTTCTGGCGTTCATCGTAACCTTGGAGTACATATATCAAAAGTAAGATCATTGACACTTGATGTGAAAGTCTGGGACTCCTCTGTTTTAACCATGTTTAAGTCACTAGGAAATCTCTTCGCAAACTCGGTTTGGGAGGAGCTGTTAGGTTCAACAAGTACTTTGCAAACTGATGATGCATCTGTTGGTTCATCCAAGGCCAACAGAGAAAAACCATTTCATGCAAGAAAACCAGAACATGATGATTCTATTTCATTAAAGGAAAGGTTCATCCATGCAAAGTACTCACAAAAAATCTTTACTTGCCGGAAAAAGAAAAACCAACCTCCCCTTTTGTCGGCACAGCAAGTGTTGGAAAGTATCTGTGCCAATGACAAAAAAGCAGTGTATCAACATATTGTCCAGTCAGAAGTAGATGTCAATGCCATCAATAGTCAAGCATTATCTGGCGGTTCTTTCAACTTGGCTTCGAGTAATTCAAGCATATCGTCTCAATGTGAAAAGCAGTTGATTGAGAACATGAAACATGGTTCTAGTTTGCTTCATCTGGCATGCCTAGCAGCCGACATTGGTATGGTGGAGCTGCTCCTGCAATATGGGGCAAATATCAATGCTTGTGATTCAAGAGGTCGGACGCCACTACATTATTGTATTACCGCAGGAAGGACTGAAGCTGCGAAAGTCCTAATTATGAGAGGGGCGAATCCACGCGTCACGGACAAAGAAGGCAACACTCCCCTTAAGCTAGCATCAGAATCTGGCTCTGTTGTTGATAGGGAAATTTTGTCTCTATTAGAAAGCAGATGA 2409 0.4226 MLWFLFRCAVLHYRLVSTSSSPAVLLLSGAVVLSSSSRSRSEGLGEVYDGDIAFVSALEDFGGGNNDPHFVALGGPVMSKFTIALREVGTFKELLRSQIEQILNDRLLQIMNVDIQEVKEARKRFDKASPVYDQAREKFMSLRKSTRPDIATTMEGELLDARTTFEEARFNLVGALNNIEAKKRFEFLEALTGIMDAHLRYFQQGYQLLHQMQPFFNEILDYVQQSKESYNKEQISLYKRMEVYKKQVYQESRMSLNGPYGSPSGDFAHPFSRISNEVADVVMESAANGKVQIIRQGYLSKRSSNLRGDWKRRYFVLDSRGMLYYYRKPWNGPHSSNQPSAQRNTTTENGPGLLSRWLSSHYHGGVHDERAVARHTVNLLTSTIKFDADQTDLRFCFRIISPSKNYTLQAENAIDQMDWMEKINGVIASLLSVQTLGMSPSADCENDDGDSDDKTDTLESSTNTDVAEKSTPKNSTPKSHLRAFMSLQLQRYSMRTERPIDVLRRVSGNNKCADCAKPEPDWASLNLGILVCIECSGVHRNLGVHISKVRSLTLDVKVWDSSVLTMFKSLGNLFANSVWEELLGSTSTLQTDDASVGSSKANREKPFHARKPEHDDSISLKERFIHAKYSQKIFTCRKKKNQPPLLSAQQVLESICANDKKAVYQHIVQSEVDVNAINSQALSGGSFNLASSNSSISSQCEKQLIENMKHGSSLLHLACLAADIGMVELLLQYGANINACDSRGRTPLHYCITAGRTEAAKVLIMRGANPRVTDKEGNTPLKLASESGSVVDREILSLLESR* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2999 802 ProSiteProfiles PH domain profile. 292 428 IPR001849 -
Aev03g2999 802 MobiDBLite consensus disorder prediction 439 478 - -
Aev03g2999 802 Pfam Putative GTPase activating protein for Arf 500 635 IPR001164 GO:0005096
Aev03g2999 802 SMART arf_gap_3 497 643 IPR001164 GO:0005096
Aev03g2999 802 Pfam PH domain 294 427 IPR001849 -
Aev03g2999 802 SMART ANK_2a 710 739 IPR002110 GO:0005515
Aev03g2999 802 SMART ANK_2a 743 772 IPR002110 GO:0005515
Aev03g2999 802 CDD ArfGap 500 629 - -
Aev03g2999 802 Pfam BAR domain of APPL family 53 232 - -
Aev03g2999 802 SUPERFAMILY ArfGap/RecO-like zinc finger 496 636 IPR037278 -
Aev03g2999 802 CDD PH_ACAP 295 432 - -
Aev03g2999 802 ProSiteProfiles Ankyrin repeat profile. 710 742 IPR002110 GO:0005515
Aev03g2999 802 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 37 802 - -
Aev03g2999 802 SUPERFAMILY PH domain-like 203 427 - -
Aev03g2999 802 PANTHER CENTAURIN/ARF 37 802 IPR045258 GO:0005096
Aev03g2999 802 ProSiteProfiles Ankyrin repeat region circular profile. 710 741 - -
Aev03g2999 802 MobiDBLite consensus disorder prediction 590 613 - -
Aev03g2999 802 Gene3D Arfaptin homology (AH) domain/BAR domain 31 250 IPR027267 -
Aev03g2999 802 SMART PH_update 293 430 IPR001849 -
Aev03g2999 802 ProSiteProfiles ARF GTPase-activating proteins domain profile. 497 643 IPR001164 GO:0005096
Aev03g2999 802 SUPERFAMILY BAR/IMD domain-like 42 315 IPR027267 -
Aev03g2999 802 PRINTS HIV Rev interacting protein signature 509 528 IPR001164 GO:0005096
Aev03g2999 802 PRINTS HIV Rev interacting protein signature 528 545 IPR001164 GO:0005096
Aev03g2999 802 PRINTS HIV Rev interacting protein signature 551 572 IPR001164 GO:0005096
Aev03g2999 802 MobiDBLite consensus disorder prediction 460 478 - -
Aev03g2999 802 CDD BAR_SFC_plant 42 215 IPR035670 -
Aev03g2999 802 Pfam Ankyrin repeats (many copies) 712 764 IPR002110 GO:0005515
Aev03g2999 802 SUPERFAMILY Ankyrin repeat 651 801 IPR036770 -
Aev03g2999 802 ProSiteProfiles Ankyrin repeat region circular profile. 743 775 - -
Aev03g2999 802 Gene3D - 285 441 IPR011993 -
Aev03g2999 802 Gene3D - 649 802 IPR036770 -
Aev03g2999 802 Gene3D Arf GTPase activating protein 478 643 IPR038508 -
Aev03g2999 802 ProSiteProfiles Ankyrin repeat profile. 743 775 IPR002110 GO:0005515
Aev03g2999 802 SMART 5bar 14 218 IPR004148 GO:0005515|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2999 Aev-Chr3 29044252 29051171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2999 497 770 C2H2 Transcription Factor Family AT4G21160 25.993 4.60e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2999 K12489 - gmx:100792517 1122.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2999 03 29044252 29051171 Aev08g2456 08 23456248 23462756 PCT