Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2992 ATGATGACCACCTTTGCAGCAAGAAGCAGAGAAGGAGTAGCAGTTGTTGAACAAGATTATGGGGTAACAATGAAAGACGATGAGTTATTAACCAAAATTCGGCTTATGAGAGCTTTTCTTGACTCACATGACGACCATCCCTCTCTAAAGGATGAAGTGGATGATTTAGTGATCAGAAGATTCCTACGAGCTCGTGGTTTAGATGTGGAGAAGGCATCAGCAATGCTGCTCAAGTGGCTGAAATGGAGGCGTTCATTTGTTCCAAATGGCTCTGTGTGTCTCTCTCAGGTTCCCAACGAAGTTGCACAGAACAAGATGTTCGCTCAAGGCCACGATAAGACTGGTCGACCTATTACCATTGTCTTCGGTGCAAGACACTTCCAAAACAATATTGGTGGCCTTGATGAATTCAGACGTTTTGTAGTTTATGGTCTTGATAAACTATGTGCCAGGATGCCAGCAGGTCAAGAAAAATTTGTTGGTATAGGAGAACTTAAGGGGTGGGGATATTCAAACAGTGATGTGCGTGGATACATTGCTTCTCTAAGAATTTTGCAGGATTACTACCCGGAAAGATTGGGGAAGTTGTTTATTGTGCACGCACCTTACATGTTTATCAAAGTGTGGAAGATTATTTACCCCTTCATTGACAATGAAACCAAGAAGAAGATAGTATTTGTGGAGAACAACAAGGTAAAGTCAACACTGCTAGAAGACATAGATGAGAGTCAGCTCCCAGAGATATATGGAGAGCCTGCCTTTAACCTCGCTCGCTGTTGTGTTGCCATCATTATATCTCATCGATCAACCACATACACTTGCCTTTTCCTTACAACCATGGATCCCGACGCATTCACCTCAACCCTTTTCAAGTGGGACCCACGAAGCCTCCTCCCAACTGCTGCTGCTCCTCCTCCTATGTCCCGCCCCCCGCTCCTTGACTACACGGTGGCTCCTCCGCCAGTGGCGCATCCAGCAGCAGCAGCAACACCGAGGGAGCAGGAGCTGGGTGGAGTAGAGGAGCTGTTCCAGGCTTACGGCGTGAGGTACTACACGGCGGCGAAGGTGGCAGAGCTAGGGTTCACGGCGAGGACGCTGGTGAATATGAAGGAGGAGGAGCTGGAGGAGATGATGAACAGCTTGTCCCACATATTCCGTTGGGATCTGCTCGTTGGGGAGCGCTACGGCATCATAGCTGCCGTCAGAGCTGAGCGAAGACGCCGCCGCCGCAACCTTGACTGCACCACCAACGCACCACCCATCGATAATGCTCTCTCTCAGGAAGGGGTGTCTGAGGAGCGGGTAGTAGTAGTGCAACAAAAGAAAGAGGCGGTGGGGAGCACGCTGGATAGCATGAGGAGGAGGAATAATAAGGAACAACAGATGACAATTAGGCAGAGGGGGATCAGGAGAATGAGAATGAGAATGACTACTCATCATCATGAGAATGAAGAACAAGAAGATGATGATGATGACGACGAAGACGCTGAGGAAGGGATGATGAACAACACTAGTAGTATTATGAATGGTGGTGAGAGGCAAAGGGAGCACCCGTTCATAGTGACAGAGGCAGGGGAGGTGGCGCGTGGGAAGAAGAACGGGCTGGACCACCTGTTCGAGCTGTACGAGCAATGCGGGGAGTTGTTGGGGGAGGTGCAGAGAATGGCGAAGGAGCGGGGCCACAAGTGCCCTACCAAGGTCACCAACGAGGTGTTCAGGTACGCCAAGGAGGCAGGGGCCACCCACATCAACAAGCCCAAGATGAGGCACTACGTCCACTGCTACGCCCTCCACTGCCTCCACCGGCCCCTCTCCGACCACCTCCGAGCAGCCTTCAAGGACAGCGGTCACAACGTCGGCGCCTGGAGGGCTGCCTGTTACAAGCCCCTCGTCGCCATCGCTGCCCTCCACGATTGGGACATTGACGCCGTCTTCAACGCCCACCCTCGCCTTTCCATTTGGTACGTTCCCACCAAGCTCCGCCAGCTTTGCCACGCCCACAGGAACAGCAACGCCGCCGCCGCTGCTGCCGCTTCCACCTCCCTCCCCCTCCCCACCACTCCTCACCTTCCACCTTTTTAA 2082 0.5216 MMTTFAARSREGVAVVEQDYGVTMKDDELLTKIRLMRAFLDSHDDHPSLKDEVDDLVIRRFLRARGLDVEKASAMLLKWLKWRRSFVPNGSVCLSQVPNEVAQNKMFAQGHDKTGRPITIVFGARHFQNNIGGLDEFRRFVVYGLDKLCARMPAGQEKFVGIGELKGWGYSNSDVRGYIASLRILQDYYPERLGKLFIVHAPYMFIKVWKIIYPFIDNETKKKIVFVENNKVKSTLLEDIDESQLPEIYGEPAFNLARCCVAIIISHRSTTYTCLFLTTMDPDAFTSTLFKWDPRSLLPTAAAPPPMSRPPLLDYTVAPPPVAHPAAAATPREQELGGVEELFQAYGVRYYTAAKVAELGFTARTLVNMKEEELEEMMNSLSHIFRWDLLVGERYGIIAAVRAERRRRRRNLDCTTNAPPIDNALSQEGVSEERVVVVQQKKEAVGSTLDSMRRRNNKEQQMTIRQRGIRRMRMRMTTHHHENEEQEDDDDDDEDAEEGMMNNTSSIMNGGERQREHPFIVTEAGEVARGKKNGLDHLFELYEQCGELLGEVQRMAKERGHKCPTKVTNEVFRYAKEAGATHINKPKMRHYVHCYALHCLHRPLSDHLRAAFKDSGHNVGAWRAACYKPLVAIAALHDWDIDAVFNAHPRLSIWYVPTKLRQLCHAHRNSNAAAAAAASTSLPLPTTPHLPPF* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2992 693 SMART sec14_4 99 254 IPR001251 -
Aev03g2992 693 MobiDBLite consensus disorder prediction 477 510 - -
Aev03g2992 693 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 94 250 IPR001251 -
Aev03g2992 693 PANTHER PROTEIN LEAFY 280 679 IPR002910 GO:0003677|GO:0006355
Aev03g2992 693 MobiDBLite consensus disorder prediction 485 499 - -
Aev03g2992 693 SUPERFAMILY CRAL/TRIO domain 97 250 IPR036865 -
Aev03g2992 693 Pfam CRAL/TRIO domain 105 250 IPR001251 -
Aev03g2992 693 SMART CRAL_TRIO_N_2 54 79 IPR011074 -
Aev03g2992 693 Gene3D - 23 255 IPR036865 -
Aev03g2992 693 Pfam Floricaula / Leafy protein SAM domain 335 407 IPR035079 -
Aev03g2992 693 Gene3D Protein LEAFY 509 678 IPR038276 -
Aev03g2992 693 SUPERFAMILY CRAL/TRIO N-terminal domain 26 89 IPR036273 -
Aev03g2992 693 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 509 672 IPR035209 GO:0003677
Aev03g2992 693 CDD SEC14 110 250 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2992 Aev-Chr3 28992438 29001502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2992 280 670 Orphan Transcription Factor Family AT5G61850 55.961 2.10e-127 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Aev03g2992 C_LFY_FLO 1.4e-90 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2992 - - gsj:114416001 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2992 03 28992438 29001502 Aev08g2468 08 23563823 23569430 PCT