Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2971 ATGGGTAGATCTCCCTGTTGCGAGAAAGAGCACACCAACAAAGGAGCTTGGACCAAAGAAGAGGATGACCGCCTCATCACCTACATCAAGGCTCACGGCGAAGGCTGTTGGAGATCTCTCCCCAAAGCCGCAGCTCGGTTACCGGGAAGAACGGATAACGAGATAAAGAACTACTGGAACACACACATAAAGCGCAAGCTCTATAGCCGTGGAATCGATCCCCAGACCCATCAACCACTCAACGCCGCTGCTGCTTCCACCCCACCCAATAACAATAACAACACTACTTGTGCATCTTCATCAGTAGCAGTACCTGCCGTCGTAGTCACCACAGCAAAAAAGAGACCTAACAACAAGGACATCATCATAAGAAGCAGCAGCAACAACAACATAAGTAGTAGTTTTCAGCTATTCGGTGCTGCTTGTGTCAATAATAATACAGCAAGGACTACTATTAAAACTGATGAGGACTCCTCAACGGGTGATGAAGATTATTCAAACAGTAGCAGTGGCGTGACAACAGAAATAGAAGCATATCCTCCTCCTCCTCCTCCTCATCAACAACAAGTACTCAACTTGGACCTCTCCTTAGGCCCTCTCCCTCCTCACGTGGCTTCAATCAAATCAAAACGACAGCGTCTAGAGCAGCAGCAGGAGGTTATATTATTCCCCTGGTATGGGCAAGTGTGCGTGTGTAACACTCGTCTAGGGTTTCAAAGCAATAATAACCAAGCAGGAGGTAGTGGTTCTTGTTGCTGCAGCAAAGCCAAGGGTAATGGTGCTGCTGTCACCTCACTCATCACTTCTACTCCTCCTTCTGCCATCACCAACACCAACACTAGTAGTAGTAATACCAATGATAATAGCAATGTGTATAGATTTTACAACTCCGTCAATATGGATAGTTAG 909 0.4653 MGRSPCCEKEHTNKGAWTKEEDDRLITYIKAHGEGCWRSLPKAAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHQPLNAAAASTPPNNNNNTTCASSSVAVPAVVVTTAKKRPNNKDIIIRSSSNNNISSSFQLFGAACVNNNTARTTIKTDEDSSTGDEDYSNSSSGVTTEIEAYPPPPPPHQQQVLNLDLSLGPLPPHVASIKSKRQRLEQQQEVILFPWYGQVCVCNTRLGFQSNNNQAGGSGSCCCSKAKGNGAAVTSLITSTPPSAITNTNTSSSNTNDNSNVYRFYNSVNMDS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2971 302 Gene3D - 12 68 - -
Aev03g2971 302 ProSiteProfiles Myb-like domain profile. 9 63 IPR001005 -
Aev03g2971 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 67 IPR017930 -
Aev03g2971 302 SMART sant 13 65 IPR001005 -
Aev03g2971 302 PANTHER TRANSCRIPTION FACTOR MYB7 1 44 - -
Aev03g2971 302 PANTHER TRANSCRIPTION FACTOR MYB7 44 218 - -
Aev03g2971 302 CDD SANT 16 63 IPR001005 -
Aev03g2971 302 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Aev03g2971 302 MobiDBLite consensus disorder prediction 152 188 - -
Aev03g2971 302 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 44 - -
Aev03g2971 302 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 44 218 - -
Aev03g2971 302 SUPERFAMILY Homeodomain-like 9 73 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2971 Aev-Chr3 28877594 28879038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2971 1 86 MYB Transcription Factor Family AT2G16720 52.593 2.61e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev03g2971 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2971 K09422 - cpap:110808617 164.466