Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2970 ATGGAGAAGCAGGCACGATTTGGGCTTATCTTCTTCTTGCTTGTTCTCCTTGCTTCTCAGGAGATGGTGGTGCAAACAGAGGGAAGGTACTGTGAGTCGCAGAGCCATAGGTTTAAGGGAAAGTGCTGGAGGGACACCAACTGCGCTTCTGTCTGCCAAACTGAAGGTTTCTCTGGTGGCAAGTGCCGTGGTTTCCGTCAACGCTGCTTTTGCACCAGAAATTGTTAA 228 0.5 MEKQARFGLIFFLLVLLASQEMVVQTEGRYCESQSHRFKGKCWRDTNCASVCQTEGFSGGKCRGFRQRCFCTRNC* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2970 75 PANTHER DEFENSIN-LIKE PROTEIN 1 4 75 - -
Aev03g2970 75 PANTHER DEFENSIN 4 75 - -
Aev03g2970 75 SUPERFAMILY Scorpion toxin-like 29 75 IPR036574 -
Aev03g2970 75 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Aev03g2970 75 PRINTS Purothionin signature 30 45 IPR008176 GO:0006952
Aev03g2970 75 PRINTS Purothionin signature 60 74 IPR008176 GO:0006952
Aev03g2970 75 SMART gth_4 30 75 IPR003614 GO:0006952
Aev03g2970 75 Pfam Gamma-thionin family 29 75 - -
Aev03g2970 75 CDD Knot1 40 72 IPR003614 GO:0006952
Aev03g2970 75 Gene3D - 29 75 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2970 Aev-Chr3 28872307 28872651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2970 8 75 Plant Defensins Gene Families AT2G02120 57.353 1.60e-25 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2970 - - pvu:PHAVU_009G158100g 118.242