Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2943 ATGCAGAAGGCTGAATTGGAATTACCACCAGGGTTTAGGTTTCACCCAACTGATGATGAGTTGGTGAATCACTACTTGTGTAGGAAATGCGCCGCCCAACCTATTTCTGTTCCTATCATCAAGGAGATCGATTTGTACAAGTTCGATCCCTGGCAGCTTCCAGAGCTGGCTCTGTACGGCGAGAAAGAATGGTACTTCTTCTCTCCAAGGGACAGGAAATATCCAAACGGCTCACGTCCGAACCGAGCGGCAGGCACCGGTTACTGGAAGGCAACCGGAGCTGATAAGCCGATTGGGAAGCCGAAGGCCCTTGCCATCAAGAAGGCGCTCGTGTTCTACGCTGGCAAGGCCCCCAAAGGAGTCAAGACCAACTGGATCATGCACGAATATCGTCTCGCTAATGTTGACAGATCCGCTCATTCCAAGAAAACCAACAACCTCAGGCTTGATGATTGGGTGTTGTGCCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAACAACGTAGGGGTGGTGGATCAGAAATCATCGTCAAAATTTTCAGATGATCAAGAGCATGAGATTGAGACCAAGCCAGAGATCAAGATGTACGGCCAGGATGGTTTCAGGAATAGCGACCAATTGTTCATGGACACGTCGGATTCGGTGCCAAGGCTGCACACCGACTCGAGCTGCTCCGAGCACGTGGTCTCGCCGGACGTCACGTGCGATAAGGAAGTGCAGAGCGAGCACAAGTGGAACGACCTTGAGCTTGGGGGGGCAGAGGCCTTCGATTTCCAGTTCAATTTCTTGGACAGTAACATGAATCTGACAGGAGATGACCCTTTTGCCCCTCAGGCCCACTACCAAATGAACAATAACCCTTGGCAGCAGGAGGAGGACGACATGTTCATGTACCTACCGAAGTCATTTTAA 918 0.5022 MQKAELELPPGFRFHPTDDELVNHYLCRKCAAQPISVPIIKEIDLYKFDPWQLPELALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKALAIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAHSKKTNNLRLDDWVLCRIYNKKGKIEKYNNVGVVDQKSSSKFSDDQEHEIETKPEIKMYGQDGFRNSDQLFMDTSDSVPRLHTDSSCSEHVVSPDVTCDKEVQSEHKWNDLELGGAEAFDFQFNFLDSNMNLTGDDPFAPQAHYQMNNNPWQQEEDDMFMYLPKSF* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2943 305 ProSiteProfiles NAC domain profile. 8 160 IPR003441 GO:0003677|GO:0006355
Aev03g2943 305 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Aev03g2943 305 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
Aev03g2943 305 PANTHER NAC TRANSCRIPTION FACTOR 56 1 274 - -
Aev03g2943 305 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 1 274 - -
Aev03g2943 305 Gene3D NAC domain 17 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2943 Aev-Chr3 28691940 28693047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2943 3 284 NAC Transcription Factor Family AT5G08790 64.460 7.16e-119 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev03g2943 NAM 3.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2943 - - gmx:100170751 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2943 03 28691940 28693047 Aev03g2943 03 28691940 28693047 ECH