Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2926 ATGGATGATGAGAGCCATAGCAGTTTTCCACCAAATGGGTTCAACACAGAAAGCCCCGAAAGTCCTTGCTTAAAGAACAACAACAACCATAGCCACAACAACAGCAACAAGGAACAGGATCGGTTTCTCCCAATAGCCAACGTTGGTAGGATCATGAAAAAAGTGATTCCTGCGAATGGGAAAATCTCAAAGGATGCAAAAGAGACAGTTCAAGAATGTGTATCAGAGTTCATAAGCTTCGTAACAGGGGAGGCATCTGACAAATGCCAGAGAGAAAAGAGGAAAACAATCAACGGTGATGATATCATTTGGGCAATCACAACATTAGGGTTTGAGGATTATGTTGAACCATTGAAATCGTACCTTCAGAAATACAGAGAGATTGAAGGAGAAAAACTTAATATTCCAAAGCAACAACGAAATTCTAATCCTGAACAGAGGCTACACCAACATCATCACCTTAATGGCCAAGATGAAAATAATCAACAGCAACAATTAAATAGTGTATATTCAATTTCTCAGCCTCCTTATGTAACCACTGATCAACCATTCTCACTGCCATTCTCACCAAATTCAATTCAGAAACAGTTACGGCCGCAAGACCAGATTGATTCAGTGGGGCATTGGTATGAGTAA 636 0.4009 MDDESHSSFPPNGFNTESPESPCLKNNNNHSHNNSNKEQDRFLPIANVGRIMKKVIPANGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVEPLKSYLQKYREIEGEKLNIPKQQRNSNPEQRLHQHHHLNGQDENNQQQQLNSVYSISQPPYVTTDQPFSLPFSPNSIQKQLRPQDQIDSVGHWYE* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2926 211 MobiDBLite consensus disorder prediction 1 40 - -
Aev03g2926 211 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 201 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev03g2926 211 MobiDBLite consensus disorder prediction 8 40 - -
Aev03g2926 211 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-7 1 201 - -
Aev03g2926 211 SUPERFAMILY Histone-fold 39 160 IPR009072 GO:0046982
Aev03g2926 211 ProSitePatterns NF-YB/HAP3 subunit signature. 73 89 IPR003956 GO:0005634|GO:0006355|GO:0043565
Aev03g2926 211 PRINTS CCAAT-binding transcription factor subunit A signature 70 88 - -
Aev03g2926 211 PRINTS CCAAT-binding transcription factor subunit A signature 89 107 - -
Aev03g2926 211 PRINTS CCAAT-binding transcription factor subunit A signature 108 126 - -
Aev03g2926 211 Gene3D Histone, subunit A 28 170 IPR009072 GO:0046982
Aev03g2926 211 MobiDBLite consensus disorder prediction 181 211 - -
Aev03g2926 211 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 42 106 IPR003958 -
Aev03g2926 211 MobiDBLite consensus disorder prediction 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2926 Aev-Chr3 28561661 28562296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2926 37 209 CCAAT-HAP3 Transcription Factor Family AT2G13570 66.484 1.25e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev03g2926 CBFD_NFYB_HMF 3e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2926 K08065 - gmx:100778216 332.028