Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2918 ATGTCCATGAACCTCCGCACGCTTCCTCTTTCTTCTTCTTCTGGGAATGTGTTCTGTCTTGTTGGGCATCATGTAAGCAAGTGGAAAACTAGTACTAGTTTATGTGATTTGGATATCAGAGTTTCTGGAAATATAAAGTGTTTCCAGAAACGTTTAGGAGCGTCCATAACATGTTCAGCTGGTGTTAGGGATGATGCTTTGTTGCCTTCAATTGAGCAATTAACCAATGCGCGAGTCATATATTCTGTCGCTGCAGCCATGGGCCACAACCAGGAGTCTCATCCAGAATCACATTTTAGAGTTCCTGCAATTGTGAAAGCTCTAGAAGAAATGAAGCTCACTTCAAAGTTCCGTGGCTCTGAGGTGATTGAACTTCAAAATTTTGAGCCGGCTTCAGTAGATGACATTGCAAGTGTGCATGCGAGATCCTATGTTTCAGGCCTTGAGAAGGTTATGGATCAAGCCTCTGAGAAGGGCCTAATTTTCATTGATGGATCTGGACCAACATATGCTACTGCCACTACCTTCCAGGAGTCAATAGTTGCAGCTGGTGCTGGATTAGCCTTAGTTGACTCAGTGGTTGCAGCTTCAAAGAAAAGCAGAGATACACCCACTGGATTTGCTTTGATAAGACCGCCAGGACACCATGCTGTTCCACAAGGGCCAATGGGCTTTTGCGTTTTTGGAAATGTGGCCATTGCTGCTCGTTATGCTCAGCGTGTTCATGGACTAAAGCGTGTATTTATAATAGACTTTGATGTTCACCATGGGAATGGAACAAATGATGCTTTCTATGATGATCCAGATATATTTTTCCTTTCAACTCATCAAGATGGAAGCTATCCAGGTACTGGCAAATTTGATGAAGTGGGTAGCGGAGATGGTGAAGGAACCACTCTAAATCTTCCTCTTCCTGGAGGATCAGGTGACACTGCTATGAGAACCGTATTCGATGAAGTCATTGTACCGTGTGCTCAAAGATTCAAGCCGGACATCATTCTTGTTTCTGCTGGGTATGATGGCCACGTGTTGGATCCACTAGCTAATCTTCAATATACAACTGGAACATATTACATGCTTGCGTCCAGTATCAAACAATTAGCAAAAGATTTATGTGGAGGGCGATGTGTGTTCTTCTTGGAAGGAGGGTACAATCTCAAGTCTCTTTCAAATTCAGTGGCAGACACATTCCGTGCTCTTCTTGGGGACAAAAGCTTGGCTTCTGAGTATGATAACCCCAATATTCTCTATGAAGAGCCTTCAGCAAAGGCTACTTCTTCTCTACCATTCCATCATCCCAACATCATACCTGATCTTCCTAATCCTCATCTTGATCCATGGCAATTAATTGGTAATGCGTTTTCAAGTGGGAATGAGCACTATTTCTTCAGCCAAAGTGAGGGAAAGATCAGGAGCACTGAAAATGGGTATTGGAAGGAAATAGGAGTGACAAAACCTATCTTGTCATCATCACAAGACAATAAGAAAGTTGGAATGAAGAAGTACTTGGTGTTCAACCTTGGTGACGGCACTCCAACAAGTTGGGTCATGGAAGAGTATCATATTTCTTCATCTGCCTTTACCCTTACCCCTACTACTTGGGGAGCATTAAAGCCTACTGATGAGAATGGGTGCAAATGGGTTTTATGCAGAGTGTATGAGAAGAAGAGTAGGTCTCATCAAGAGGCAGCAGCTGCAAACTACTACTACACTGATGAGGATGACAGTGGGACTGAACTTTCATGGCTAGATGAGGTTTATCTCTCATTAGATGATGATCTTGAAGAAATCAACAACCCCGCCTAA 1806 0.4313 MSMNLRTLPLSSSSGNVFCLVGHHVSKWKTSTSLCDLDIRVSGNIKCFQKRLGASITCSAGVRDDALLPSIEQLTNARVIYSVAAAMGHNQESHPESHFRVPAIVKALEEMKLTSKFRGSEVIELQNFEPASVDDIASVHARSYVSGLEKVMDQASEKGLIFIDGSGPTYATATTFQESIVAAGAGLALVDSVVAASKKSRDTPTGFALIRPPGHHAVPQGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKFDEVGSGDGEGTTLNLPLPGGSGDTAMRTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLANLQYTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSNSVADTFRALLGDKSLASEYDNPNILYEEPSAKATSSLPFHHPNIIPDLPNPHLDPWQLIGNAFSSGNEHYFFSQSEGKIRSTENGYWKEIGVTKPILSSSQDNKKVGMKKYLVFNLGDGTPTSWVMEEYHISSSAFTLTPTTWGALKPTDENGCKWVLCRVYEKKSRSHQEAAAANYYYTDEDDSGTELSWLDEVYLSLDDDLEEINNPA* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2918 601 CDD HDAC_classII 94 401 - -
Aev03g2918 601 Pfam No apical meristem (NAM) protein 431 522 IPR003441 GO:0003677|GO:0006355
Aev03g2918 601 Gene3D Histone deacetylase domain 76 424 IPR037138 -
Aev03g2918 601 PANTHER HISTONE DEACETYLASE 45 424 - -
Aev03g2918 601 ProSiteProfiles NAC domain profile. 393 555 IPR003441 GO:0003677|GO:0006355
Aev03g2918 601 PANTHER HISTONE DEACETYLASE 14 45 424 - -
Aev03g2918 601 Pfam Histone deacetylase domain 94 399 IPR023801 -
Aev03g2918 601 PRINTS Histone deacetylase superfamily signature 212 235 IPR000286 -
Aev03g2918 601 PRINTS Histone deacetylase superfamily signature 246 261 IPR000286 -
Aev03g2918 601 PRINTS Histone deacetylase superfamily signature 330 340 IPR000286 -
Aev03g2918 601 SUPERFAMILY Arginase/deacetylase 89 405 IPR023696 -
Aev03g2918 601 SUPERFAMILY NAC domain 429 555 IPR036093 GO:0003677|GO:0006355
Aev03g2918 601 Gene3D NAC domain 425 560 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2918 Aev-Chr3 28515577 28525196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2918 385 556 NAC Transcription Factor Family AT5G13180 34.595 2.58e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev03g2918 Hist_deacetyl 7.8e-87 CL0302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2918 - - cam:101515579 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2918 03 28515577 28525196 Aev03g2918 03 28515577 28525196 ECH