Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2916 ATGACCATTCCACACTTATTCAGATGCCCTATAAGTTTAGACTTGTTTGAAGATCCTGTGACTTTGTGCACAGGCCAAACCTATGACAGATCAAGCATAGAAAAATGGTTATCTGCAGGAAATCTCACTTGCCCTGTCACAATGCAGAGGCTCCATGATCTGTCCATTGTTCCCAACCACACCCTTCGCCACTTGATTCACCAGTGGCTTGAACTTGCTCCCAAATTTGACCCTGGCAGCTCTGCAACTACTGTGGACTCTTTAGCTTCTTTGAAGAACACCCTTGAATCTCAAGATGCCACCTTAGAGAACAAGCTCCAAGCACTTAGGAAAATCAAGGTCTTATCTGATGAGTTTTGCTCTTTTAGGAGATCATGTTTCCTTGAATTGGGGTTCTTACCCCTACTTTTGGAACTTGTTTTCGGAAGAGCAGAATCTAAGGATCACATGAAATTCACAGAGTTGGCACTTTTTTGTATCCTAAAATTGCTGCCTCTTGGGAATTTGGAGCCTCTAAATATGATCAAAGATGAGTCTAAATTAGCAACATTTATACTGTTATTTGAAAAAGGCACTAGCTTGGTTAAGACTAGCTTGTGTCATCTCATAGAATCAGTATCATCATCTGAGACCACACAAGAGTTATGCTGTGTTCTTGGAAGCTCTCACAAACTAGTGCATGAGATTGTTCAAGTTGCTCGCCGAAATTGCGAGTCGTCTGAGGATGCAGTTAAGGCCATATCAGCACTAAGTTCCTTGCAATCTAATAGAGAGGTTTTGGTAAGAGAAGGAGCAGTAGATGGTATCATAACATACATTTCATCAGGTTATGAAAGGAGGCACAAGAACTTGGCTCCACTGGCAATACTAGAGAAACTTGTGGAGCTAGAAAGTGGAAGAGAAGCATTGGTGAATCACCCAAATGGGATTGAAACTTTGGTGAATATGGTATTCAGGGTATCTGATCAAGAATGCAGTGAGAGTGCTGTTGGGATACTTTTGATTGTTTGTGGTGATTTTGGTCATGCAAGAGAGGAAGCCATTGGTGCTGGAATTATGACTAGGTTGCTGTTGCTTATGCAGAGTCGTTGTGGCAACACAACAAAATCAAAGGCCAGATTGCTGCTCAAATTGCTAAAATCCAAGTGGATTGAGGAGCCAAAGTAG 1167 0.4182 MTIPHLFRCPISLDLFEDPVTLCTGQTYDRSSIEKWLSAGNLTCPVTMQRLHDLSIVPNHTLRHLIHQWLELAPKFDPGSSATTVDSLASLKNTLESQDATLENKLQALRKIKVLSDEFCSFRRSCFLELGFLPLLLELVFGRAESKDHMKFTELALFCILKLLPLGNLEPLNMIKDESKLATFILLFEKGTSLVKTSLCHLIESVSSSETTQELCCVLGSSHKLVHEIVQVARRNCESSEDAVKAISALSSLQSNREVLVREGAVDGIITYISSGYERRHKNLAPLAILEKLVELESGREALVNHPNGIETLVNMVFRVSDQECSESAVGILLIVCGDFGHAREEAIGAGIMTRLLLLMQSRCGNTTKSKARLLLKLLKSKWIEEPK* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2916 388 CDD RING-Ubox_PUB 7 49 IPR045210 -
Aev03g2916 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 74 IPR013083 -
Aev03g2916 388 Gene3D - 81 285 IPR011989 -
Aev03g2916 388 SUPERFAMILY ARM repeat 90 378 IPR016024 -
Aev03g2916 388 PANTHER OS02G0542800 PROTEIN 1 382 - -
Aev03g2916 388 Pfam U-box domain 3 71 IPR003613 GO:0004842|GO:0016567
Aev03g2916 388 SMART Ubox_2 6 69 IPR003613 GO:0004842|GO:0016567
Aev03g2916 388 ProSiteProfiles U-box domain profile. 2 76 IPR003613 GO:0004842|GO:0016567
Aev03g2916 388 PANTHER WDSAM1 PROTEIN 1 382 IPR045185 GO:0061630
Aev03g2916 388 Coils Coil 88 112 - -
Aev03g2916 388 Gene3D - 286 375 IPR011989 -
Aev03g2916 388 SUPERFAMILY RING/U-box 2 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2916 Aev-Chr3 28506129 28507295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2916 1 383 U-box Gene Family AT3G19380 32.663 1.03e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2916 - - gmx:100815247 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2916 03 28506129 28507295 Aev03g2916 03 28506129 28507295 ECH