Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2902 ATGGATAGGAAGCATGATGATGAGAATATTAATAGTGCTGCAAGTGCATTAACAAATGTAAACAACAGCACCGGTGCTGCTACTTCTACGTGGAATATGCACAATATGATGATGCAAACAGCAGCAGCAGCTGCAGCAGAAGTAGGACAAGAGTACGATGACGACCACCATCACATAATTGTCCAAGTACAACAAGCAGCACATCATCACCACCAAATCCCTATGGCTAATTCAGCATCTGGAATTGGGATTTGGCCAAACCACCTTGTTCATCATCAAATGCAATCAGTACCACCAATAATATCCACTACTACTACTACTACTACGACTTCTTCTTCATCGGCAGGATTCCTTGGTGACATACTAGGCATGCACATACAAGAGGAAGAGGAGGAAGAAGCAGAAGAGGAATTAGAGGAGCTGGGGGCGATGAAGGAGATGATGTTCAAGATGGCGGCGATGCAGCCAGTGGAGATCGACCCTGCGTGGATCCGGAAGCCCAAGAGGCGGAACGTGAGAATAAGCGAGGACCCGCAGAGCGTGGCGGCGCGGCACAGAAGAGAGAGGATAAGTGAGAAGATGCGCATACTGCAGAGGCTGGTCCCCGGCGGAACCAAGATGGACACCGCTTCCATGCTCGATGAAGCCATCCGCTATGTCAAGTTCTTGAAGCGACAGATCAGGCTCCTTCAGCACCCTCCACCACCACATTGCATTACTGCTCCTGCTCCTGCTCCTCCCACCGGCAGCACTATTATTGGGGATTATTATTATTATTGTTGGCCTTTTGCTGCACCATCCTCCTCCTCCTCCTCCTCTTCAACTATGATACACACTTCTGCCACTGCTGCTGCTCCCATGGATAATAGTAATAATAATAATAATGTGGCAGCTGATGATGGAGGCCTTGGCTCCTCCACCTTTAATTAA 930 0.486 MDRKHDDENINSAASALTNVNNSTGAATSTWNMHNMMMQTAAAAAAEVGQEYDDDHHHIIVQVQQAAHHHHQIPMANSASGIGIWPNHLVHHQMQSVPPIISTTTTTTTTSSSSAGFLGDILGMHIQEEEEEEAEEELEELGAMKEMMFKMAAMQPVEIDPAWIRKPKRRNVRISEDPQSVAARHRRERISEKMRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQHPPPPHCITAPAPAPPTGSTIIGDYYYYCWPFAAPSSSSSSSSTMIHTSATAAAPMDNSNNNNNVAADDGGLGSSTFN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2902 309 SMART finulus 180 229 IPR011598 GO:0046983
Aev03g2902 309 MobiDBLite consensus disorder prediction 284 309 - -
Aev03g2902 309 Pfam Helix-loop-helix DNA-binding domain 184 223 IPR011598 GO:0046983
Aev03g2902 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 179 232 IPR036638 GO:0046983
Aev03g2902 309 CDD bHLH_AtIND_like 175 231 - -
Aev03g2902 309 Gene3D - 177 233 IPR036638 GO:0046983
Aev03g2902 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 174 223 IPR011598 GO:0046983
Aev03g2902 309 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 28 280 IPR045843 GO:0003700|GO:0006355
Aev03g2902 309 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 28 280 - -
Aev03g2902 309 Coils Coil 124 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2902 Aev-Chr3 28360735 28361664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2902 141 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 83.168 6.30e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev03g2902 HLH 6.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2902 - - gmx:100779374 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2902 03 28360735 28361664 Aev03g2902 03 28360735 28361664 ECH
Aev03g2902 03 28360735 28361664 Aev08g0594 08 3407201 3408103 PCT