Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2900 ATGCCCACCACCACCATCACTCCCTCAATCCTCGCTATGGCTTCCTTCCTCTCTCTCACCTCCCTCTCCCTCCTCCTCCTCCTCACCCTCTCCTCCGCCACCCTCCACCACCATCACAATCACAATCACAATTCCAATTCCCCTGTCGCCGCCACCACCCCTTCCCCTGAAATCCAGCAAGCCTGCAAGGCCACACGCTTCCCCCAGCAATGCGAATCCACCCTCTCCCAATCCACAGACCTCCCAACCAACCCAACCGCTCTCCAGCTCCTCCAGTCCGCCATTTCCGCATCCTCTAACAACCTCCTAACCGCCCAGTCCATGGTCAAGTCCATCCTTGACTCCTCCAAAGACAGCGTCAACCGCACCGTCGCCGCCACCACCTGCCTCCAGATCCTCGCAAACTCTATCCACCGCCTCTCCCAAGCCACCGACGCCCTCCCACGCGGCAGAAACAAGGACGCCCGCGCGTGGCTCAGCGCCAACCTCGCCTATCAGTACGACTGCTGGAACAGCCTCAAGTACGCCAACGACACAGCAAAGGTCGCCGAAACGATGTCGTTCATCGACAACCTCACGGTCCTCTCCGCCAACGCGCTCGCCATCGCGTTCTCGTACGACGCGTTCGGCAACCAAACGGCGTCGTGGAGGCCGCCCATGACGGAGCGTGACGGATTCTGGGAATCTTCCGGGTCGGTTGGAGGGTCCGGACCCGGGTTCCCGGTGAAGGTGACTCCAGACGTAACGGTATGCAAGGGAGGGTGTAATTACAAGACGGTGCAAGAAGCCGTTAATGCAGCACCGGGTAACGGTAACAGCGTTGATGGGGGACGGAGGTTCGTGATATACATTAAGGAAGGGGTTTATGAGGAGACCGTTAGGGTGCCGTTAGAGAAGACGAATGTGGTGTTCTTGGGCGACGGTATGGGTAAGACGGTAATTACAGGCTCTGCAAATGTTGGCCAACCCGGCATGACCACTTACAACTCTGCCACAGTCGCTGTTCTTGGCGATGGGTTCATGGCAAAGGATCTCACAATCAAAAACACAGCAGGCCCTGATGCTCACCAAGCTGTGGCATTCAGACTAGACAGTGATCTTTCAATCATTGAAAGCTGCGAATTCATTGGCAACCAGGACACCCTCTATGCCCATTCCCTGCGCCAATTCTACAAATCATGCCGCATCATAGGCAACGTGGACTTCATATTCGGCAACTCTGCCGCGATCTTCCAAGACTGCCAGATCTTGGTGGCGCCGCGGCAGCTGAAGCCGGAGAAGGGCGAGAACAACGCCATCACCGCACATGGCAGGACAGACCCTGCACAATCCACAGGGTTTGTTTTCCAGAACTGCTTGATCAATGGGACAGAGGAGTACATGGCATTGTACCACAGCAAGCCACAGGTGCACAAGAACTACTTGGGTAGGCCATGGAAGGAGTACTCCAGGACTGTTTTCATTCATTCCGTCTTGGAAGAACTGATCACACCACAGGGTTGGATGCCATGGAGTGGTGATTTTGCTCTCAAGACACTTTACTACGGGGAATATGAGAATTCAGGAGCAGGTTCTGATTTGTCTCAGAGGGTGAATTGGAGTAGCAAGGTTCCTGCTGATCATGTGATGGCCTATTCAGTGCAGAATTTCATTCAAGGGAATGATTGGGATCCTTCCTCTCAGTTAATATCCCATATTCATGCCAGGCATCATCACTAG 1719 0.548 MPTTTITPSILAMASFLSLTSLSLLLLLTLSSATLHHHHNHNHNSNSPVAATTPSPEIQQACKATRFPQQCESTLSQSTDLPTNPTALQLLQSAISASSNNLLTAQSMVKSILDSSKDSVNRTVAATTCLQILANSIHRLSQATDALPRGRNKDARAWLSANLAYQYDCWNSLKYANDTAKVAETMSFIDNLTVLSANALAIAFSYDAFGNQTASWRPPMTERDGFWESSGSVGGSGPGFPVKVTPDVTVCKGGCNYKTVQEAVNAAPGNGNSVDGGRRFVIYIKEGVYEETVRVPLEKTNVVFLGDGMGKTVITGSANVGQPGMTTYNSATVAVLGDGFMAKDLTIKNTAGPDAHQAVAFRLDSDLSIIESCEFIGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSAAIFQDCQILVAPRQLKPEKGENNAITAHGRTDPAQSTGFVFQNCLINGTEEYMALYHSKPQVHKNYLGRPWKEYSRTVFIHSVLEELITPQGWMPWSGDFALKTLYYGEYENSGAGSDLSQRVNWSSKVPADHVMAYSVQNFIQGNDWDPSSQLISHIHARHHH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2900 572 Pfam Plant invertase/pectin methylesterase inhibitor 58 202 IPR006501 GO:0004857
Aev03g2900 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 205 IPR035513 -
Aev03g2900 572 SUPERFAMILY Pectin lyase-like 245 559 IPR011050 -
Aev03g2900 572 Pfam Pectinesterase 247 554 IPR000070 GO:0030599|GO:0042545
Aev03g2900 572 CDD PMEI-like_3 61 202 - -
Aev03g2900 572 SMART PMEI_2 53 202 IPR006501 GO:0004857
Aev03g2900 572 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 202 IPR006501 GO:0004857
Aev03g2900 572 PANTHER PECTINESTERASE 26 556 - -
Aev03g2900 572 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 26 556 - -
Aev03g2900 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 202 IPR035513 -
Aev03g2900 572 Gene3D - 241 565 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2900 Aev-Chr3 28341722 28344181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2900 47 556 Carbohydrate Esterase AT5G09760 65.251 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2900 - - adu:107480269 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2900 03 28341722 28344181 Aev03g2900 03 28341722 28344181 ECH
Aev03g2900 03 28341722 28344181 Aev08g0597 08 3419606 3421200 PCT