Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2895 ATGCTGAGTTCTGATGAAGGAGGTAATGATGAATTCTTTGATTCAGTGGATAGTTTGTCAACTCAAGATTCTTTTTTAGCAGAAGGAGATTTTGGTTCTGGATTTTGTGGTGGTTGTGATTATGAAATTTGGGTGAATGAGCCAGTTAGTGTGAAGGAAAGAAGGGAAAGGTTTCTTCAGGGTATGGGTTTAGTTGATACTTGTTCTTGCAAGGTGTGTTCACAAGAAGAAATGAAGAACTTTGATGCCTTATCCATTAGCTCTGGAATTGATAGGGTCAGGGAGTGCACTGGAGCAGTCCTAAATGCTTGCATTTCTCCTGCTGCTCAAGCATCTGTGAAGTTGGTTCAACCTGAATTGAAAGCGGCTTCCGAAGCAATAGTCTTGTTTGATCAATCGAAAGAGTGTCCCCAAGGTGAACCAGGTGCAAGTTTTCAGGGGGAAGTGCATGAGCAATCTTCTTCAGCTCAGGAGCAGAGAGACAGAGAACCTGAGGCACAAGAAGGATTTCAAGATTTTGATACGGGTGGTAGAAAAAAAGAAAGGAAAAAATGGTGGAAGCGATTTGTAAAAAACATCAGGAAAGGCAGTGAAGGAAATGTCAGATCAAAATTGAATGCAGGGACCAACAAAACTTGTAGAATAAAGGTAAGGCAGAATAAAAAGAGGTGGCTAGAGTTCAGTGGGCTATACATTGGACAACAGATTAGAGCACACGAAGGCCTAATTTGGACTATGAAATTTAGTCCTAATGGTAAGTATTTAGCGAGTGGAGGTGAAGATGGCATTGTGCGCGTATGGCATGTTGTATCGCTCGATACATCCAGTATTTGTTTCGGTGAAGAAGATGCTGGCAAAGTGAAACATTACAACTCTTCTCTTTGGAAGAAACACTCGCGCCAATCCTTCATTTTCCTTCCAAATAAGATTTTTCAAATTCATAAATTGCCATTGCAAGAATTTTATGGTCATTCTAGTGATGTCTTGGATTTGGCTTGGTCTAACTCAGATTCAGATCTTCTCCTCTCATCTTCTACGGATAAAACTGTTCGCCTGTGGCAAATTGGTTCTAGTCAATGTTTAAGTGTTTTCCACCACAACGACTATGTAACATGCATTCAGTTCAACCCTGTTGATGAAAATTACTTCATCAGCGGATCAATTGACGGAAAAGTTCGAATATGGGGGATACACGAAGAGCGAGTTATTGACTGGGCAGATATACATGATGTCATAAGTGCTATAAGTTACCAAGAAGATGGAAAGGGATTTGTAGTTGGTTCCATTAATGGCACTTGTTGCTTCTATGTCGCCTCAGGAAAATATTTCCAGCTTGAGGCGCAGATACATGTCCATGGAAAGAAGAAAGCGGCAGGCAACAAGATTACTAGCATTCAGTGTTCCAATAAAAATCGCCAGAGAATTATGATCACATCAGAAGATTCCAAAATTCGCGTATTTGATGGCATTGATCTTGCTCGGAAGTACACAGGCCTTCCAAAGTCAGGAACTCAGATATCAGGTTCATTTACACCAAATGGTAAACATATAATTTCAGTTGGAGAGGATTCCCATGTCTATATTTGGAATTTGAATGACTTGAGAAATACTTCTTCCAAGTGCACAAAATCCGAGCACTCCTGCGAGTACTTTTTCTCCAAGGGTGTTACCGTTGCGATACCTTGGCCAGGTATGAAAGCAGAACCAAGAGGCTCTAACAGTAGTGTAGCTAACCCTTCTTCAGAAACACAAACCCAACAAGAGGCTGCAGCTGAGGTTAGAGAATCAGAGCGATTCTCTCTCGGTAATTGGTTCTCCACTGATGGTCCATGCCGAGGTTCCACGACATGGCCCGAGGAGAAACTTCCAAGCTGGGATTTACCTCTAGCAGAACATGAATATGATCATCACCGGCAGCGGCAGCAGCAGTTATGTCACAGAAAAGATGGTGTATCAGAAACATGGGGACTATCAATTGTGGCAGCTGGTTGTGATGGAACCATCAAGACATTCCACAACTTCGGGTTGCCAATTAGGCTCTAG 2043 0.42 MLSSDEGGNDEFFDSVDSLSTQDSFLAEGDFGSGFCGGCDYEIWVNEPVSVKERRERFLQGMGLVDTCSCKVCSQEEMKNFDALSISSGIDRVRECTGAVLNACISPAAQASVKLVQPELKAASEAIVLFDQSKECPQGEPGASFQGEVHEQSSSAQEQRDREPEAQEGFQDFDTGGRKKERKKWWKRFVKNIRKGSEGNVRSKLNAGTNKTCRIKVRQNKKRWLEFSGLYIGQQIRAHEGLIWTMKFSPNGKYLASGGEDGIVRVWHVVSLDTSSICFGEEDAGKVKHYNSSLWKKHSRQSFIFLPNKIFQIHKLPLQEFYGHSSDVLDLAWSNSDSDLLLSSSTDKTVRLWQIGSSQCLSVFHHNDYVTCIQFNPVDENYFISGSIDGKVRIWGIHEERVIDWADIHDVISAISYQEDGKGFVVGSINGTCCFYVASGKYFQLEAQIHVHGKKKAAGNKITSIQCSNKNRQRIMITSEDSKIRVFDGIDLARKYTGLPKSGTQISGSFTPNGKHIISVGEDSHVYIWNLNDLRNTSSKCTKSEHSCEYFFSKGVTVAIPWPGMKAEPRGSNSSVANPSSETQTQQEAAAEVRESERFSLGNWFSTDGPCRGSTTWPEEKLPSWDLPLAEHEYDHHRQRQQQLCHRKDGVSETWGLSIVAAGCDGTIKTFHNFGLPIRL* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2895 680 ProSiteProfiles Trp-Asp (WD) repeats profile. 321 363 IPR001680 GO:0005515
Aev03g2895 680 Gene3D - 228 555 IPR015943 GO:0005515
Aev03g2895 680 ProSiteProfiles Trp-Asp (WD) repeats profile. 236 277 IPR001680 GO:0005515
Aev03g2895 680 MobiDBLite consensus disorder prediction 154 179 - -
Aev03g2895 680 ProSiteProfiles Trp-Asp (WD) repeats profile. 363 405 IPR001680 GO:0005515
Aev03g2895 680 MobiDBLite consensus disorder prediction 564 590 - -
Aev03g2895 680 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 363 395 - -
Aev03g2895 680 ProSiteProfiles Trp-Asp (WD) repeats profile. 509 539 IPR001680 GO:0005515
Aev03g2895 680 SMART WD40_4 314 354 IPR001680 GO:0005515
Aev03g2895 680 SMART WD40_4 357 396 IPR001680 GO:0005515
Aev03g2895 680 SMART WD40_4 491 530 IPR001680 GO:0005515
Aev03g2895 680 SMART WD40_4 442 488 IPR001680 GO:0005515
Aev03g2895 680 SMART WD40_4 229 268 IPR001680 GO:0005515
Aev03g2895 680 SMART WD40_4 398 437 IPR001680 GO:0005515
Aev03g2895 680 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 1 680 - -
Aev03g2895 680 SUPERFAMILY WD40 repeat-like 230 670 IPR036322 GO:0005515
Aev03g2895 680 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 321 355 - -
Aev03g2895 680 ProSitePatterns Trp-Asp (WD) repeats signature. 517 531 IPR019775 -
Aev03g2895 680 MobiDBLite consensus disorder prediction 135 179 - -
Aev03g2895 680 Pfam WD domain, G-beta repeat 359 395 IPR001680 GO:0005515
Aev03g2895 680 Pfam WD domain, G-beta repeat 236 267 IPR001680 GO:0005515
Aev03g2895 680 Pfam WD domain, G-beta repeat 510 530 IPR001680 GO:0005515
Aev03g2895 680 Pfam WD domain, G-beta repeat 317 353 IPR001680 GO:0005515
Aev03g2895 680 MobiDBLite consensus disorder prediction 571 590 - -
Aev03g2895 680 PANTHER WD REPEAT DOMAIN 44 1 680 IPR040324 -
Aev03g2895 680 PRINTS G protein beta WD-40 repeat signature 341 355 IPR020472 -
Aev03g2895 680 PRINTS G protein beta WD-40 repeat signature 383 397 IPR020472 -
Aev03g2895 680 PRINTS G protein beta WD-40 repeat signature 255 269 IPR020472 -
Aev03g2895 680 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 236 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2895 Aev-Chr3 28319637 28322750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2895 318 550 U-box Gene Family AT2G33340 26.250 2.80e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2895 K20241 - gmx:100819135 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2895 03 28319637 28322750 Aev08g0601 08 3440968 3443702 PCT